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COMPARE project deliverables

The page lists 22 deliverables related to the research project "COMPARE".

 List of Deliverables

COMPARE: list of downloadable deliverables.
title and desprition type last update

Data analysis pipeline

D2.4 Evaluated and documented data analysis pipeline (M24 and onwards)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Other 2020-04-25

Analytical workflow for clinical diagnostic application

D3.1 Analytical workflow for clinical diagnostic application (M18)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Other 2020-04-25

Prediction algorithm AMR markers

D3.2 Prediction algorithm for antimicrobial resistance markers in sequence data (M24)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Documents, reports 2020-04-25

Public website

D13.3 COMPARE public website (month 3);

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Websites, patent fillings, videos etc. 2020-04-25

Sequencing workflow

D2.3 Sequencing workflow including relevant NGS platforms (M36)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Documents, reports 2020-04-25

Methodologies report

D14.2 State-of-the-art methodologies for the measurement and valuation of the elements specified in the framework. This will include a section on the system itself and on the wider framework (Month 30);

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Documents, reports 2020-04-25

Automated tools for rapid assessment of key transmission parameters

D1.1 Automated tools for rapid assessment of key transmission parameters and rates of spread estimates (M24)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Other 2020-04-25

Leaflet and templates

D13.2 Leaflet and templates for promotional material in COMPARE corporate style (month 3);

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Websites, patent fillings, videos etc. 2020-04-25

Matrix-dependent sample handling protocols

D2.1 Matrix-dependent sample handling protocols for human, animal, wildlife/vectors and food samples (M12)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Documents, reports 2020-04-25

Phylogenetic and phylogeographic tools

D5.3 Phylogenetic and phylogeographic tools for epidemiological investigations and rapid risk assessment (M30)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Other 2020-04-25

CE Framework

D14.1 Framework for assessing cost-effectiveness of COMPARE in which key costs and benefits are highlighted. This will include a section on the system itself and on the wider framework (Month 18);

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Other 2020-04-25

Standard protocol sample processing

D2.2 Standard protocol for sample processing (M24)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Documents, reports 2020-04-25

Algorithm for detection of informative (sub)types

D4.2 Algorithm for detection of informative (sub)types for epidemiological analysis and RA for the main foodborne pathogens (M32)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Documents, reports 2020-04-25

Risk based surveillance plans, sampling algorithms and protocols

D1.2 Risk based surveillance plans, sampling algorithms and protocols for surveillance of emerging and foodborne diseases and pathogens not covered by existing surveillance (M40)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Documents, reports 2019-10-15

Validated RA model for NGS data

D4.4 Validated SA model for NGS data (M48)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Other 2019-10-15

Tools for rapid sequence based detection of strain specific clusters

D5.2 Tools for rapid sequence based detection of strain specific clusters in time, place and host for the main emerging pathogen classes (M30)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Other 2019-10-15

Analytical workflow

D4.3 Analytical workflow for epidemiological handling of and response to food-borne outbreaks in Europe (M48)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Other 2019-10-15

Generic workflow engine

D9.3 Generic workflow engine supporting assembly and functional annotation workflows (Month 36)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Other 2019-10-15

Methods for prediction of pathogen phenotype from genotype)

D5.5 Methods for prediction of pathogen phenotype from genotype data and structure models (M42)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Other 2019-10-15

Generic RA framework

D1.3 Generic risk assessment framework to target surveillance activities and outbreak investigations (M46)

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Other 2019-10-15

Case study cost-effectiveness report

D14.4 Report on the (potential) cost-effectiveness of COMPARE, based on the case studies
(scenario/pilot/retrospective studies). Each case study presented will include a section on elements related to the system and on the wider framework (Month 54);

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

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Documents, reports 2019-10-15

Paper on methodology and results of estimating the value of safety

D14.3 A scientific paper describing the methodology and results of estimating the value of safety, with the results from several European countries (Month 45);

Programme: H2020-EU.3.1.2. - Topic(s): PHC-07-2014

download deliverable 

Documents, reports 2019-10-15