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OXIDISE SIGNED

Interaction and Kinetics of Oxidative Biomass Degrading Enzymes Resolved by High-Resolution Techniques

Total Cost €

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EC-Contrib. €

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Partnership

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 OXIDISE project word cloud

Explore the words cloud of the OXIDISE project. It provides you a very rough idea of what is the project "OXIDISE" about.

enzymes    polymeric    occurring    spatial    optimal    lignin    substrates    cascading    constituents    depolymerisation    cellulosic    samples    microelectrodes    elucidate    detect    electron    vicinity    minimal    members    dehydrogenase    resolve    lytic    biopolymers    damage    quality    oxidoreductase    cellulose    fluorescence    industrial    lignocellulosic    oxidoreductases    polysaccharide    fungal    perform    difficult    mission    experimental    biocatalysts    kinetics    monooxygenase    redox    strives    pursuing    natural    hence    secreted    naturally    industry    temporal    gmc    superfamily    poor    surface    assaying    feedstocks    characterisation    techniques    genomes    substrate    microscopy    appropriate    current    recalcitrant    optimisation    hyphae    overcome    oxidative    deconstruction    laccase    regeneration    transfer    peroxidase    interactions    thereby    fungi    oxidise    scanning    class    attack    segregation    cellobiose    90    resonance    resolution    conversions    rates    interaction    species    enzyme    unspecific    plasmon    regard    lignocellulose    degrading    characterise   

Project "OXIDISE" data sheet

The following table provides information about the project.

Coordinator
UNIVERSITAET FUER BODENKULTUR WIEN 

Organization address
address: GREGOR MENDEL STRASSE 33
city: WIEN
postcode: 1180
website: www.boku.ac.at

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Austria [AT]
 Total cost 1˙929˙319 €
 EC max contribution 1˙929˙319 € (100%)
 Programme 1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
 Code Call ERC-2016-COG
 Funding Scheme ERC-COG
 Starting year 2017
 Duration (year-month-day) from 2017-03-01   to  2022-02-28

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    UNIVERSITAET FUER BODENKULTUR WIEN AT (WIEN) coordinator 1˙929˙319.00

Map

 Project objective

Current processes for lignocellulose deconstruction are unspecific and produce some constituents in poor quality. Specific biocatalysts could achieve optimal segregation together with minimal damage to cellulose and lignin and provide high-quality feedstocks for industry. Naturally occurring fungal oxidoreductases perform this task, but their characterisation – and hence their optimisation for industrial application – is difficult because of the experimental challenges. The mission of OXIDISE to develop appropriate methods to characterise lignocellulose degrading oxidoreductases, i.e. elucidate their conversions rates and to resolve their distribution and interaction in vicinity of their polymeric substrates. High-resolution techniques will be adapted to specifically detect fungal oxidoreductases like lytic polysaccharide monooxygenase, cellobiose dehydrogenase, laccase, lignin peroxidase, or members of the GMC oxidoreductase superfamily. These enzymes are all involved in the oxidative attack of recalcitrant biopolymers and are present in over 90% of fungal genomes. To overcome problems of current assaying techniques such as their low spatial and temporal resolution, OXIDISE will develop and apply techniques based on microelectrodes, scanning electron microscopy, surface plasmon resonance and fluorescence microscopy thereby pursuing three objectives: 1) study the interaction of all major oxidoreductases secreted by fungi in regard to electron transfer, regeneration of redox species and substrate cascading; 2) resolve the distribution of secreted oxidoreductases on cellulosic and lignocellulosic substrates at high resolution; 3) transfer the developed techniques to natural lignocellulose samples with growing fungal hyphae and study the secreted oxidoreductase activities. OXIDISE strives to establish new techniques to elucidate the kinetics and interactions of oxidoreductases – a long neglected enzyme class for lignocellulose depolymerisation.

 Publications

year authors and title journal last update
List of publications.
2020 Jani Tuoriniemi, Lo Gorton, Roland Ludwig, Gulnara Safina
Determination of the Distance Between the Cytochrome and Dehydrogenase Domains of Immobilized Cellobiose Dehydrogenase by Using Surface Plasmon Resonance with a Center of Mass Based Model
published pages: 2620-2627, ISSN: 0003-2700, DOI: 10.1021/acs.analchem.9b04490
Analytical Chemistry 92/3 2020-04-01
2020 Annabelle T. Abrera, Hucheng Chang, Daniel Kracher, Roland Ludwig, Dietmar Haltrich
Characterization of pyranose oxidase variants for bioelectrocatalytic applications
published pages: 140335, ISSN: 1570-9639, DOI: 10.1016/j.bbapap.2019.140335
Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 1868/2 2020-04-01
2020 Stefan Scheiblbrandner, Roland Ludwig
Cellobiose dehydrogenase: Bioelectrochemical insights and applications
published pages: 107345, ISSN: 1567-5394, DOI: 10.1016/j.bioelechem.2019.107345
Bioelectrochemistry 131 2019-10-03
2019 Su Ma, Christophe V. F. P. Laurent, Marta Meneghello, Jani Tuoriniemi, Chris Oostenbrink, Lo Gorton, Philip N. Bartlett, Roland Ludwig
Direct Electron-Transfer Anisotropy of a Site-Specifically Immobilized Cellobiose Dehydrogenase
published pages: 7607-7615, ISSN: 2155-5435, DOI: 10.1021/acscatal.9b02014
ACS Catalysis 9/8 2019-10-03
2018 Marta Meneghello, Firas A. Al‐Lolage, Su Ma, Roland Ludwig, Philip N. Bartlett
Studying Direct Electron Transfer by Site‐Directed Immobilization of Cellobiose Dehydrogenase
published pages: 700-713, ISSN: 2196-0216, DOI: 10.1002/celc.201801503
ChemElectroChem 6/3 2019-10-03
2019 Su Ma, Roland Ludwig
Direct Electron Transfer of Enzymes Facilitated by Cytochromes
published pages: 958-975, ISSN: 2196-0216, DOI: 10.1002/celc.201801256
ChemElectroChem 6/4 2019-10-03
2018 Leander Sützl, Christophe V. F. P. Laurent, Annabelle T. Abrera, Georg Schütz, Roland Ludwig, Dietmar Haltrich
Multiplicity of enzymatic functions in the CAZy AA3 family
published pages: 2477-2492, ISSN: 0175-7598, DOI: 10.1007/s00253-018-8784-0
Applied Microbiology and Biotechnology 102/6 2019-05-29

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