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OXIDISE SIGNED

Interaction and Kinetics of Oxidative Biomass Degrading Enzymes Resolved by High-Resolution Techniques

Total Cost €

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EC-Contrib. €

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Partnership

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 OXIDISE project word cloud

Explore the words cloud of the OXIDISE project. It provides you a very rough idea of what is the project "OXIDISE" about.

industry    current    recalcitrant    resolution    unspecific    surface    enzymes    resonance    optimisation    rates    pursuing    industrial    depolymerisation    deconstruction    oxidoreductases    biocatalysts    overcome    cascading    thereby    experimental    polysaccharide    perform    substrate    fungal    interaction    laccase    degrading    conversions    enzyme    lytic    fluorescence    cellulosic    mission    resolve    scanning    quality    kinetics    interactions    90    genomes    naturally    characterisation    substrates    biopolymers    secreted    poor    oxidise    gmc    class    difficult    plasmon    assaying    spatial    natural    peroxidase    microscopy    fungi    hyphae    species    transfer    electron    members    regeneration    detect    feedstocks    hence    samples    characterise    dehydrogenase    damage    constituents    lignocellulose    lignocellulosic    cellulose    redox    oxidoreductase    minimal    temporal    microelectrodes    monooxygenase    cellobiose    attack    superfamily    techniques    regard    strives    elucidate    oxidative    appropriate    polymeric    occurring    segregation    vicinity    optimal    lignin   

Project "OXIDISE" data sheet

The following table provides information about the project.

Coordinator
UNIVERSITAET FUER BODENKULTUR WIEN 

Organization address
address: GREGOR MENDEL STRASSE 33
city: WIEN
postcode: 1180
website: www.boku.ac.at

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Austria [AT]
 Total cost 1˙929˙319 €
 EC max contribution 1˙929˙319 € (100%)
 Programme 1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
 Code Call ERC-2016-COG
 Funding Scheme ERC-COG
 Starting year 2017
 Duration (year-month-day) from 2017-03-01   to  2022-02-28

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    UNIVERSITAET FUER BODENKULTUR WIEN AT (WIEN) coordinator 1˙929˙319.00

Map

 Project objective

Current processes for lignocellulose deconstruction are unspecific and produce some constituents in poor quality. Specific biocatalysts could achieve optimal segregation together with minimal damage to cellulose and lignin and provide high-quality feedstocks for industry. Naturally occurring fungal oxidoreductases perform this task, but their characterisation – and hence their optimisation for industrial application – is difficult because of the experimental challenges. The mission of OXIDISE to develop appropriate methods to characterise lignocellulose degrading oxidoreductases, i.e. elucidate their conversions rates and to resolve their distribution and interaction in vicinity of their polymeric substrates. High-resolution techniques will be adapted to specifically detect fungal oxidoreductases like lytic polysaccharide monooxygenase, cellobiose dehydrogenase, laccase, lignin peroxidase, or members of the GMC oxidoreductase superfamily. These enzymes are all involved in the oxidative attack of recalcitrant biopolymers and are present in over 90% of fungal genomes. To overcome problems of current assaying techniques such as their low spatial and temporal resolution, OXIDISE will develop and apply techniques based on microelectrodes, scanning electron microscopy, surface plasmon resonance and fluorescence microscopy thereby pursuing three objectives: 1) study the interaction of all major oxidoreductases secreted by fungi in regard to electron transfer, regeneration of redox species and substrate cascading; 2) resolve the distribution of secreted oxidoreductases on cellulosic and lignocellulosic substrates at high resolution; 3) transfer the developed techniques to natural lignocellulose samples with growing fungal hyphae and study the secreted oxidoreductase activities. OXIDISE strives to establish new techniques to elucidate the kinetics and interactions of oxidoreductases – a long neglected enzyme class for lignocellulose depolymerisation.

 Publications

year authors and title journal last update
List of publications.
2020 Jani Tuoriniemi, Lo Gorton, Roland Ludwig, Gulnara Safina
Determination of the Distance Between the Cytochrome and Dehydrogenase Domains of Immobilized Cellobiose Dehydrogenase by Using Surface Plasmon Resonance with a Center of Mass Based Model
published pages: 2620-2627, ISSN: 0003-2700, DOI: 10.1021/acs.analchem.9b04490
Analytical Chemistry 92/3 2020-04-01
2020 Annabelle T. Abrera, Hucheng Chang, Daniel Kracher, Roland Ludwig, Dietmar Haltrich
Characterization of pyranose oxidase variants for bioelectrocatalytic applications
published pages: 140335, ISSN: 1570-9639, DOI: 10.1016/j.bbapap.2019.140335
Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics 1868/2 2020-04-01
2020 Stefan Scheiblbrandner, Roland Ludwig
Cellobiose dehydrogenase: Bioelectrochemical insights and applications
published pages: 107345, ISSN: 1567-5394, DOI: 10.1016/j.bioelechem.2019.107345
Bioelectrochemistry 131 2019-10-03
2019 Su Ma, Christophe V. F. P. Laurent, Marta Meneghello, Jani Tuoriniemi, Chris Oostenbrink, Lo Gorton, Philip N. Bartlett, Roland Ludwig
Direct Electron-Transfer Anisotropy of a Site-Specifically Immobilized Cellobiose Dehydrogenase
published pages: 7607-7615, ISSN: 2155-5435, DOI: 10.1021/acscatal.9b02014
ACS Catalysis 9/8 2019-10-03
2018 Marta Meneghello, Firas A. Al‐Lolage, Su Ma, Roland Ludwig, Philip N. Bartlett
Studying Direct Electron Transfer by Site‐Directed Immobilization of Cellobiose Dehydrogenase
published pages: 700-713, ISSN: 2196-0216, DOI: 10.1002/celc.201801503
ChemElectroChem 6/3 2019-10-03
2019 Su Ma, Roland Ludwig
Direct Electron Transfer of Enzymes Facilitated by Cytochromes
published pages: 958-975, ISSN: 2196-0216, DOI: 10.1002/celc.201801256
ChemElectroChem 6/4 2019-10-03
2018 Leander Sützl, Christophe V. F. P. Laurent, Annabelle T. Abrera, Georg Schütz, Roland Ludwig, Dietmar Haltrich
Multiplicity of enzymatic functions in the CAZy AA3 family
published pages: 2477-2492, ISSN: 0175-7598, DOI: 10.1007/s00253-018-8784-0
Applied Microbiology and Biotechnology 102/6 2019-05-29

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