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EMIGRATE

Exploring MIcrobial networking in pesticides biodeGRAdaTion: novel inocula and biocatalysts for biodepuration of agro-industrial Effluents

Total Cost €

EC-Contrib. €

Partnership

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Outcomes and
results

EMIGRATE project word cloud

Explore the words cloud of the EMIGRATE project. It provides you a very rough idea of what is the project "EMIGRATE" about.

packages isotopic re lack capacity recalcitrance agro wp2 microbial pattern isotope risk pollutants amplicon phylogenetic situ natural sequencing techniques biotechnological ipr innovative form integration effluents meta regarding clean bacterial biological public metabolic engagement biocatalysts fungicide enzymes isolation pivotal wp1 identification wp4 coherence functional deal genomics bioengineering tools wp6 catabolic academic industrial packaging probing training skill assign thiabendazole local wp5 wp7 metabolomics metabolism members strategies roles biodegradation emigrate model genes wp3 transcriptomics driving degrading constitute plants elucidate complete fellow pesticides toxicity depuration community pesticide considering microbes characterization stable mostly fruit interactions secondments environmental

Project "EMIGRATE" data sheet

The following table provides information about the project.

Coordinator	PANEPISTIMIO THESSALIAS Organization address address: ARGONAFTON FILELLINON city: VOLOS postcode: 38221 website: www.uth.gr contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.
Coordinator Country	Greece [EL]
Project website	http://emigrate.bio.uth.gr
Total cost	152˙653 €
EC max contribution	152˙653 € (100%)
Programme	1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
Code Call	H2020-MSCA-IF-2016
Funding Scheme	MSCA-IF-EF-RI
Starting year	2017
Duration (year-month-day)	from 2017-07-01 to 2019-06-30

Partnership

Take a look of project's partnership.

#	participants	country	role	EC contrib. [€]
1	PANEPISTIMIO THESSALIAS PANEPISTIMIO THESSALIAS Organization address address: ARGONAFTON FILELLINON city: VOLOS postcode: 38221 website: www.uth.gr contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	EL (VOLOS)	coordinator	152˙653.00

Map

Project objective

Pesticides constitute priority pollutants for natural resources. Microbes, mostly in the form of microbial consortia are pivotal in the in situ pesticide biodegradation. EMIGRATE aims to investigate the complex interactions driving the coherence and biodegradation capacity of natural bacterial consortia, and through this, enable the production of biotechnological and bioengineering tools for novel environmental clean-up strategies. A microbial consortium degrading the fungicide thiabendazole used in fruit-packaging plants will be used as a model. This choice is based on the high biotechnological potential of this consortium considering the environmental risk associated with the use pattern, recalcitrance and toxicity of this fungicide and the complete lack of information regarding its microbial metabolism. Through its innovative research EMIGRATE will facilitate the re-integration of the fellow to the local and EU research community. Project's objectives will be achieved through 7 work-packages: WP1 will deal with project management, IPR and results exploitation, WP2 will focus on fellow's training and WP3 on the dissemination and public engagement of project's findings. WP4 will focus on the in-depth phylogenetic characterization of the bacterial consortium and the identification of the roles of consortium members on pesticide metabolism (Stable Isotope Probing - amplicon sequencing). WP5 will assign wider functional roles to consortium members, identify key catabolic genes and elucidate the metabolic pathway of the fungicide via a meta-genomics, -transcriptomics, -metabolomics approach. Finally, WP6 and WP7 will exploit the bacterial consortium for isolation of novel enzymes-biocatalysts and the development of an innovative biological process for the depuration of the relevant agro-industrial effluents. Secondments to academic and industrial partners will be carried out for skill development of the fellow on isotopic techniques, metabolomics and bioengineering.

Publications

List of publications.
year	authors and title	journal	last update
2018	Vasileiadis, Sotirios Perruchon, Chiara Omirou, Michalis Steinbach, Nicole Chatzinotas, Antonis Karpouzas, Dimitrios G Interactomics of the degradation of a recalcitrant pesticide by a soil-enriched bacterial consortium published pages: , ISSN: , DOI:		2019-10-29
2018	Vasileiadis, Sotirios Perruchon, Chiara Omirou, Michalis Scheer, Benjamin Adrian, Lorenz Steinbach, Nicole Chatzinotas, Antonis Karpouzas, Dimitrios G. Elucidating the roles and interactions of the members of a bacterial consortium along the degradation of the recalcitrant fungicide thiabendazole via a multi-omic approach published pages: , ISSN: , DOI:		2019-10-29

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