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StressNetAdapt SIGNED

Understanding evolutionary abiotic stress-network plasticity as foundation for new biotechnological strategies

Total Cost €

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EC-Contrib. €

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Partnership

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 StressNetAdapt project word cloud

Explore the words cloud of the StressNetAdapt project. It provides you a very rough idea of what is the project "StressNetAdapt" about.

criteria    species    glycophyte    candidate    close    drought    physically    salt    crop    combination    society    biotechnological    arabidopsis    interaction    relatives    stresses    thaliana    graph    lyrata    analysed    alignability    list    population    proteins    ing    reference    changed    informed    tested    stress    map    constitutes    climate    data    respect    crops    functionally    literature    biotechnologically    threaten    rewired    exploited    capacity    dynamic    interactome    plants    signalling    modified    brassicaceae    ranked    understand    biomass    theoretical    brassica    napus    transferred    conceptual    altering    pipeline    regulators    interacting    network    salsugineum    abiotic    environmental    plant    events    assembled    networks    performance    feed    direct    biological    first    differential    tolerance    mediated    world    statistical    tolerant    commercially    genetically    opportunity    biology    evolutionary    halleri    candidates    mapping    sensitive    critical    closely    integration    whereas    experimentally    alignment    adapt    validated    deal   

Project "StressNetAdapt" data sheet

The following table provides information about the project.

Coordinator
HELMHOLTZ ZENTRUM MUENCHEN DEUTSCHES FORSCHUNGSZENTRUM FUER GESUNDHEIT UND UMWELT GMBH 

Organization address
address: INGOLSTADTER LANDSTRASSE 1
city: NEUHERBERG
postcode: 85764
website: www.helmholtz-muenchen.de

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
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 Coordinator Country Germany [DE]
 Project website https://www.helmholtz-muenchen.de/en/inet
 Total cost 1˙996˙750 €
 EC max contribution 1˙996˙750 € (100%)
 Programme 1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
 Code Call ERC-2014-CoG
 Funding Scheme ERC-COG
 Starting year 2015
 Duration (year-month-day) from 2015-09-01   to  2020-08-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    HELMHOLTZ ZENTRUM MUENCHEN DEUTSCHES FORSCHUNGSZENTRUM FUER GESUNDHEIT UND UMWELT GMBH DE (NEUHERBERG) coordinator 1˙437˙046.00
2    TECHNISCHE UNIVERSITAET MUENCHEN DE (MUENCHEN) participant 559˙703.00

Map

 Project objective

Abiotic stresses, such as drought or salt stress, affect plant growth and threaten the capacity to feed a growing world population. Understanding and altering how plants deal with stress will be critical for society’s adaptation to a changed climate. I propose a novel systems-biology based approach to identify biotechnological targets based on comparison of interaction and signalling networks of evolutionary related species that show differential abiotic stress tolerance. Similar to most crops, Arabidopsis thaliana is an abiotic-stress sensitive glycophyte whereas several close relatives are stress tolerant. This constitutes an opportunity to understand how plant stress-signalling networks are modified by evolutionary processes to adapt to novel environmental conditions. Biological processes are mediated by physically and functionally interacting proteins. Especially stress response networks are rewired when plants adapt to new environmental conditions. I aim to experimentally map the abiotic stress networks of four closely related brassicaceae: A. thaliana, A. lyrata, A. halleri and E. salsugineum. Novel conceptual advances in interactome mapping and a state-of-the art interactome mapping pipeline will be exploited to ensure direct alignability of the resulting reference networks. In addition the dynamic signalling events under drought stress will be analysed. Using a combination of network alignment, graph theoretical and statistical analyses, data integration, and literature-informed criteria a ranked candidate list of stress response regulators will be assembled. These will be genetically and biotechnologically validated. First level candidates will be tested in Arabidopsis thaliana and evaluated with respect to stress tolerance and overall biomass production. The most promising targets will then be transferred to Brassica napus to evaluate the performance in a commercially relevant crop.

 Publications

year authors and title journal last update
List of publications.
2016 Junshi Yazaki, Mary Galli, Alice Y. Kim, Kazumasa Nito, Fernando Aleman, Katherine N. Chang, Anne-Ruxandra Carvunis, Rosa Quan, Hien Nguyen, Liang Song, José M. Alvarez, Shao-shan Carol Huang, Huaming Chen, Niroshan Ramachandran, Stefan Altmann, Rodrigo A. Gutiérrez, David E. Hill, Julian I. Schroeder, Joanne Chory, Joshua LaBaer, Marc Vidal, Pascal Braun, Joseph R. Ecker
Mapping transcription factor interactome networks using HaloTag protein arrays
published pages: E4238-E4247, ISSN: 0027-8424, DOI: 10.1073/pnas.1603229113
Proceedings of the National Academy of Sciences 113/29 2019-06-06

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