Explore the words cloud of the PROSEQO project. It provides you a very rough idea of what is the project "PROSEQO" about.
The following table provides information about the project.
Coordinator |
FONDAZIONE ISTITUTO ITALIANO DI TECNOLOGIA
Organization address contact info |
Coordinator Country | Italy [IT] |
Project website | http://www.singleproteinsequencing.eu |
Total cost | 2˙906˙801 € |
EC max contribution | 2˙906˙801 € (100%) |
Programme |
1. H2020-EU.1.2.1. (FET Open) |
Code Call | H2020-FETOPEN-2014-2015-RIA |
Funding Scheme | RIA |
Starting year | 2016 |
Duration (year-month-day) | from 2016-03-01 to 2019-02-28 |
Take a look of project's partnership.
# | ||||
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1 | FONDAZIONE ISTITUTO ITALIANO DI TECNOLOGIA | IT (GENOVA) | coordinator | 811˙663.00 |
2 | UNIVERSITE PARIS-SUD | FR (ORSAY CEDEX) | participant | 709˙708.00 |
3 | UNIVERSITAT DE BARCELONA | ES (BARCELONA) | participant | 649˙643.00 |
4 | ALACRIS THERANOSTICS GMBH | DE (BERLIN) | participant | 374˙625.00 |
5 | AB ANALITICA SRL | IT (PADOVA) | participant | 361˙160.00 |
The advent of analytical techniques with extremely low limits of detection has led to dramatic progresses mostly in the field of nucleic acids sequencing. Despite the advent of the next generation sequencing platforms, the current genome sequencing task remains formidable, and revolutionary advances in DNA sequencing technology are still demanded. Nevertheless, the primary actors in virtually all life processes are the proteins coded by DNA sequences known as genes. Proteins can yield far more compelling revelations than may be gleaned from DNA alone. Protein sequencing may radically transform patient treatment, enabling precise monitoring of disease response to therapeutics at the molecular level. Single-molecule sequencing of proteins is of enormous value, offering the potential to detect diminishingly small quantities of proteins that may have been altered by alternative splicing or post-translational modification. In this project, we build upon current state-of-the-art sequencing technologies to develop novel proof-of-principle technologies for high-throughput protein sequencing and single molecule DNA/RNA sequencing. The work proposed herein will provide: (i) a new sequencing technology development that utilizes plasmonic nanostructures in order to enhance the optical detection and to control the molecules movement by means of optical trapping; (ii) a novel approach of plasmonic based optical spectroscopy for sequencing of protein; (iii), a rigorous analytical model to reconstruct the exact sequence from the signals recorded; and (iv) a plasmonic device that can perform both nucleic acids and amino-acids sequencing in one functional unit. These research efforts provide a foundation for the novel use of systems for a wide range of applications, such as the framework to investigate next generation protein sequencing, as well as high-throughput DNA sequencing and genetic diagnostics.
Demonstrator of SERS detection of single amino-acid | Demonstrators, pilots, prototypes | 2019-06-27 20:27:30 |
Demonstrator of integrated platform with micro/nanofluidics and nanotrapping elements | Demonstrators, pilots, prototypes | 2019-06-27 20:27:21 |
Demonstrator of FRET intensity and lifetime spectroscopic detection | Demonstrators, pilots, prototypes | 2019-06-27 20:27:23 |
Public report on sequencing tests n.3 | Documents, reports | 2019-06-27 20:27:21 |
Demonstrator of multiple plasmonic nanotrap platform | Demonstrators, pilots, prototypes | 2019-06-27 20:27:20 |
Public version of the Final Report | Documents, reports | 2019-06-27 20:27:28 |
Demonstrator of integrated optical system | Demonstrators, pilots, prototypes | 2019-06-27 20:27:19 |
Computational demonstration of final protocol of detection | Demonstrators, pilots, prototypes | 2019-05-20 14:08:21 |
Demonstrator of steerable optical trap | Demonstrators, pilots, prototypes | 2019-05-20 14:08:21 |
Report on nanofabrication process for multi-nanochannel integrated system | Documents, reports | 2019-05-20 14:08:21 |
Public report on sequencing tests n.1 | Documents, reports | 2019-05-20 14:08:20 |
Report on design of multi-nanochannel nanostructure integrated with plasmonic nanotrapping | Documents, reports | 2019-05-20 14:08:20 |
Public report on sequencing tests n.2 | Documents, reports | 2019-05-20 14:08:20 |
Data management plan | Other | 2019-05-30 13:14:12 |
Online publication of the PROSEQO website | Documents, reports | 2019-05-30 13:14:11 |
Report on project communication n.1 | Documents, reports | 2019-05-20 14:08:20 |
Take a look to the deliverables list in detail: detailed list of PROSEQO deliverables.
year | authors and title | journal | last update |
---|---|---|---|
2018 |
Chi Chen, Lijiao Ao, Yu-Tang Wu, Vjona Cifliku, Marcelina Cardoso Dos Santos, Emmanuel Bourrier, Martina Delbianco, David Parker, Jurriaan M. Zwier, Liang Huang, Niko Hildebrandt Single-Nanoparticle Cell Barcoding by Tunable FRET from Lanthanides to Quantum Dots published pages: 13686-13690, ISSN: 1433-7851, DOI: 10.1002/anie.201807585 |
Angewandte Chemie International Edition 57/41 | 2019-05-20 |
2018 |
Xue Qiu, Jingyue Xu, Jiajia Guo, Akram Yahia-Ammar, Nikiforos-Ioannis Kapetanakis, Isabelle Duroux-Richard, Julia J. Unterluggauer, Nicole Golob-Schwarzl, Christophe Regeard, Catherine Uzan, Sébastien Gouy, Michael DuBow, Johannes Haybaeck, Florence Apparailly, Pierre Busson, Niko Hildebrandt Advanced microRNA-based cancer diagnostics using amplified time-gated FRET published pages: 8046-8055, ISSN: 2041-6520, DOI: 10.1039/c8sc03121e |
Chemical Science 9/42 | 2019-05-20 |
2019 |
Jiajia Guo, Carlos Mingoes, Xue Qiu, Niko Hildebrandt Simple, Amplified, and Multiplexed Detection of MicroRNAs Using Time-Gated FRET and Hybridization Chain Reaction published pages: 3101-3109, ISSN: 0003-2700, DOI: 10.1021/acs.analchem.8b05600 |
Analytical Chemistry 91/4 | 2019-05-20 |
2018 |
Jiajia Guo, Xue Qiu, Carlos Mingoes, Jeffrey R. Deschamps, Kimihiro Susumu, Igor L. Medintz, Niko Hildebrandt Conformational Details of Quantum Dot-DNA Resolved by Förster Resonance Energy Transfer Lifetime Nanoruler published pages: 505-514, ISSN: 1936-0851, DOI: 10.1021/acsnano.8b07137 |
ACS Nano 13/1 | 2019-05-20 |
2018 |
Alexandra Petreto, Marcelina Cardoso Dos Santos, Olivier Lefebvre, Gabriel Ribeiro Dos Santos, Paolo Ponzellini, Denis Garoli, Francesco De Angelis, Mehdi Ammar, Niko Hildebrandt Optimizing FRET on Aluminum Surfaces via Controlled Attachment of Fluorescent Dyes published pages: 18867-18876, ISSN: 2470-1343, DOI: 10.1021/acsomega.8b02774 |
ACS Omega 3/12 | 2019-05-20 |
2018 |
Xue Qiu, Jiajia Guo, Jingyue Xu, Niko Hildebrandt Three-Dimensional FRET Multiplexing for DNA Quantification with Attomolar Detection Limits published pages: 4379-4384, ISSN: 1948-7185, DOI: 10.1021/acs.jpclett.8b01944 |
The Journal of Physical Chemistry Letters 9/15 | 2019-05-28 |
2018 |
Chi Chen, Clyde Midelet, Shashi Bhuckory, Niko Hildebrandt, Martinus H. V. Werts Nanosurface Energy Transfer from Long-Lifetime Terbium Donors to Gold Nanoparticles published pages: 17566-17574, ISSN: 1932-7447, DOI: 10.1021/acs.jpcc.8b06539 |
The Journal of Physical Chemistry C 122/30 | 2019-05-28 |
2018 |
Paolo Ponzellini, Xavier Zambrana-Puyalto, Nicolò Maccaferri, Luca Lanzanò, Francesco De Angelis, Denis Garoli Plasmonic zero mode waveguide for highly confined and enhanced fluorescence emission published pages: 17362-17369, ISSN: 2040-3364, DOI: 10.1039/c8nr04103b |
Nanoscale 10/36 | 2019-05-28 |
2018 |
M. Cardoso Dos Santos, J. Goetz, H. Bartenlian, K.-L. Wong, L. J. Charbonnière, N. Hildebrandt Autofluorescence-Free Live-Cell Imaging Using Terbium Nanoparticles published pages: 1327-1334, ISSN: 1043-1802, DOI: 10.1021/acs.bioconjchem.8b00069 |
Bioconjugate Chemistry 29/4 | 2019-05-28 |
2018 |
Denis Garoli, Dario Mosconi, Ermanno Miele, Nicolò Maccaferri, Matteo Ardini, Giorgia Giovannini, Michele Dipalo, Stefano Agnoli, Francesco De Angelis Hybrid plasmonic nanostructures based on controlled integration of MoS 2 flakes on metallic nanoholes published pages: 17105-17111, ISSN: 2040-3364, DOI: 10.1039/c8nr05026k |
Nanoscale 10/36 | 2019-05-28 |
2017 |
P. Zilio, M. Dipalo, F. Tantussi, G. C. Messina, and F. De Angelis Hot electrons in water : injection and ponderomotive acceleration by means of plasmonic nanoelectrodes published pages: , ISSN: 2047-7538, DOI: |
Light Science and applications 6 | 2019-05-20 |
2016 |
Denis Garoli, Pierfrancesco Zilio, Yuri Gorodetski, Francesco Tantussi, Francesco De Angelis Beaming of Helical Light from Plasmonic Vortices via Adiabatically Tapered Nanotip published pages: 6636-6643, ISSN: 1530-6984, DOI: 10.1021/acs.nanolett.6b03359 |
Nano Letters 16/10 | 2019-05-20 |
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The information about "PROSEQO" are provided by the European Opendata Portal: CORDIS opendata.