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DESIREE SIGNED

Decision Support and Information Management System for Breast Cancer

Total Cost €

EC-Contrib. €

Partnership

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Outcomes and
results

DESIREE project word cloud

Explore the words cloud of the DESIREE project. It provides you a very rough idea of what is the project "DESIREE" about.

healing sources presented specialized few outcome difficulty quality intervention tools explored vast amount biomarkers patient desiree psychological hampered iintuitive situation breast characterization complexity imaging influence era mining view guidelines bu ecosystem care prognostic pressure fusion units disease pbc retrospective modality daily analytics multidisciplinary tool deciding implications deal conservative patients predictive setting guideline limitations exerted standard data therapy variables image leveraging predict interfaces represented digital dbcp decision aesthetic diagnostic visual exploratory reflect holistic tumor incorporating collaborative personalized web dss bus woman physiological incorporated outcomes model clinical options amounts software cancer alleviate primary

Project "DESIREE" data sheet

The following table provides information about the project.

Coordinator	FUNDACION CENTRO DE TECNOLOGIAS DE INTERACCION VISUAL Y COMUNICACIONES VICOMTECH Organization address address: PASEO MIKELETEGI PARQUE TECNOLOGICO DE MIRAMON 57 city: DONOSTIA SAN SEBASTIAN postcode: 20009 website: www.vicomtech.org contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.
Coordinator Country	Spain [ES]
Project website	http://desiree-project.eu/
Total cost	3˙340˙720 €
EC max contribution	3˙340˙720 € (100%)
Programme	1. H2020-EU.3.1.5. (Methods and data)
Code Call	H2020-PHC-2015-single-stage
Funding Scheme	RIA
Starting year	2016
Duration (year-month-day)	from 2016-02-01 to 2019-07-31

Partnership

Take a look of project's partnership.

#	participants	country	role	EC contrib. [€]
1	FUNDACION CENTRO DE TECNOLOGIAS DE INTERACCION VISUAL Y COMUNICACIONES VICOMTECH FUNDACION CENTRO DE TECNOLOGIAS DE INTERACCION VISUAL Y COMUNICACIONES VICOMTECH Organization address address: PASEO MIKELETEGI PARQUE TECNOLOGICO DE MIRAMON 57 city: DONOSTIA SAN SEBASTIAN postcode: 20009 website: www.vicomtech.org contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	ES (DONOSTIA SAN SEBASTIAN)	coordinator	586˙623.00
2	UNIVERSITY OF ULSTER UNIVERSITY OF ULSTER Organization address address: CROMORE ROAD city: COLERAINE postcode: BT52 1SA website: www.ulster.ac.uk contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	UK (COLERAINE)	participant	513˙625.00
3	INSTITUT NATIONAL DE LA SANTE ET DE LA RECHERCHE MEDICALE INSTITUT NATIONAL DE LA SANTE ET DE LA RECHERCHE MEDICALE Organization address address: RUE DE TOLBIAC 101 city: PARIS postcode: 75654 website: www.inserm.fr contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	FR (PARIS)	participant	402˙035.00
4	THE METHODIST HOSPITAL RESEARCH INSTITUTE THE METHODIST HOSPITAL RESEARCH INSTITUTE Organization address address: FANNIN STREET 6565 city: HOUSTON TX postcode: 77030 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	US (HOUSTON TX)	participant	356˙305.00
5	ARIVIS AG ARIVIS AG Organization address address: EINSTEINSTRASSE 10 city: UNTERSCHLEISSHEIM postcode: 85716 website: http://www.arivis.com contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	DE (UNTERSCHLEISSHEIM)	participant	350˙250.00
6	MEDICAL INNOVATION AND TECHNOLOGY SINGLE MEMBER PC MEDICAL INNOVATION AND TECHNOLOGY SINGLE MEMBER PC Organization address address: DHMHTRIOY THEMELI 20 city: MESOLONGI postcode: 30200 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	EL (MESOLONGI)	participant	261˙466.00
7	BILBOMATICA SA BILBOMATICA SA Organization address address: C SANTIAGO DE COMPOSTELA 12 4A EDIFICIO MIRIBILLA city: BILBAO postcode: 48003 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	ES (BILBAO)	participant	252˙825.00
8	ASSISTANCE PUBLIQUE HOPITAUX DE PARIS ASSISTANCE PUBLIQUE HOPITAUX DE PARIS Organization address address: 3 AVENUE VICTORIA city: PARIS postcode: 75000 website: http://www.aphp.fr contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	FR (PARIS)	participant	194˙375.00
9	Exploraciones Radiológicas Especiales S.L. Exploraciones Radiológicas Especiales S.L. Organization address address: Calle Colon 1, 5a Planta city: Valencia postcode: 46004 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	ES (Valencia)	participant	168˙975.00
10	FUNDACION ONKOLOGIKOA FUNDAZIOA FUNDACION ONKOLOGIKOA FUNDAZIOA Organization address address: PASEO DR BEGUIRISTAIN 121 city: DONOSTIA SAN SEBASTIAN postcode: 20014 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	ES (DONOSTIA SAN SEBASTIAN)	participant	155˙115.00
11	SISTEMAS GENOMICOS SL SISTEMAS GENOMICOS SL Organization address address: RONDA G MARCONI - PARQUE TECNOLOGICO DE VALENCIA 6 city: PATERNA postcode: 46980 website: www.sistemasgenomicos.com contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	ES (PATERNA)	participant	99˙125.00
12	UNIVERSITY OF HOUSTON SYSTEM UNIVERSITY OF HOUSTON SYSTEM Organization address address: EZEKIEL CULLEN BUILDING 203 city: HOUSTON postcode: 772042022 website: www.uh.edu contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	US (HOUSTON)	participant	0.00

Map

Project objective

Breast cancer is the most common type of cancer affecting woman in the EU. Multidisciplinary Breast Units (BUs) were introduced in order to deal efficiently with breast cancer cases, setting guideline-based quality procedures and a high standard of care. However, daily practice in the BUs is hampered by the complexity of the disease, the vast amount of patient and disease data available in the digital era, the difficulty in coordination, the pressure exerted by the system and the difficulty in deciding on cases that guidelines do not reflect. DESIREE aims to alleviate this situation by providing a web-based software ecosystem for the personalized, collaborative and multidisciplinary management of primary breast cancer (PBC) by specialized BUs. Decision support will be provided on the available therapy options by incorporating experience from previous cases and outcomes into an evolving knowledge model, going beyond the limitations of the few existing guideline-based decision support systems (DSS). Patient cases will be represented by a novel digital breast cancer patient (DBCP) data model, incorporating variables relevant for decision and novel sources of information and biomarkers of diagnostic and prognostic value, providing a holistic view of the patient presented to the BU through specialized visual exploratory interfaces. The influence of new variables and biomarkers in current and previous cases will be explored by a set of data mining and visual analytics tools, leveraging large amounts of retrospective data. Iintuitive web-based tools for multi-modality image analysis and fusion will be developed, providing advanced imaging biomarkers for breast and tumor characterization. Finally, a predictive tool for breast conservative therapy will be incorporated, based on a multi-scale physiological model, allowing to predict the aesthetic outcome of the intervention and the healing process, with important clinical and psychological implications for the patients.

Deliverables

List of deliverables.
Project dissemination and communication plan	Documents, reports	2020-01-14 14:50:19
DESIREE project website	Websites, patent fillings, videos etc.	2019-11-07 14:27:12

Take a look to the deliverables list in detail: detailed list of DESIREE deliverables.

Publications

List of publications.
year	authors and title	journal	last update
2019	Seroussi, B.; Prebet, C.; Ngo, C.; Teixeira, L.; GuÃ©zennec, G.; Bouaud, J. Using the Recommendations Inferred by a Decision Support System to Compare Breast Cancer Clinical Practice Guidelines. published pages: 60-64, ISSN: , DOI: 10.3233/978-1-61499-959-1-60	Studies in Health Technology and Informatics: 258: ICT for Health Science Research 4	2019-11-07
2017	SÃ©roussi, Brigitte; Guezennec, Gilles; Lamy, Jean-Baptiste; Muro, Naiara; Larburu, Nekane; Sekar, Booma Devi; Prebet, Coralie; Bouaud, Jacques Reconciliation of multiple guidelines for decision support: a case study on the multidisciplinary management of breast cancer within the DESIREE project. published pages: PMID: 29854222, ISSN: , DOI: 10.5281/zenodo.1466821	AMIA Annual Symposium Proceedings, Online Archive, Â©2017 AMIA 2	2019-11-07
2019	Andrik Rampun, Bryan W. Scotney, Philip J. Morrow, Hui Wang, John Winder Segmentation of breast MR images using a generalised 2D mathematical model with inflation and deflation forces of active contours published pages: 44-60, ISSN: 0933-3657, DOI: 10.1016/j.artmed.2018.10.007	Artificial Intelligence in Medicine 97	2019-11-07
2019	Muro, Naiara; Larburu, Nekane; Jacques Bouaud; Brigitte Seroussi Gathering Real World Evidence Through the Evaluation of Decision History published pages: 134 - 137, ISSN: , DOI: 10.3233/SHTI190035	Studies in Health Technology and Informatics: 262: Health Informatics Vision: From Data via Information to Knowledge 2	2019-11-07
2019	Rampun, Andrik; Scotney, Bryan W.; Morrow, Philip J.; Wang, Hui Breast Density Classification using Local Septenary Patterns: A Multi-resolution and Multi-Topology Approach published pages: , ISSN: , DOI: 10.5281/zenodo.3353623	4	2019-11-07
2019	Lamy, Jean-Baptiste; Sekar, Boomadevi; GuÃ©zennec, Gilles; Bouaud, Jacques; SÃ©roussi, Brigitte Hierarchical visual case-based reasoning for supporting breast cancer therapy published pages: , ISSN: , DOI: 10.5281/zenodo.3353732	2	2019-11-07
2016	AzpÃroz Puente, Marina DESIREE - Decision Support and Information Management System for Breast Cancer published pages: , ISSN: , DOI: 10.5281/zenodo.1466892	1	2019-11-07
2018	Andrik Rampun, Bryan Scotney, Philip Morrow, Hui Wang, John Winder Breast Density Classification Using Local Quinary Patterns with Various Neighbourhood Topologies published pages: 14, ISSN: 2313-433X, DOI: 10.3390/jimaging4010014	Journal of Imaging 4/1	2019-11-07
2019	Larburu, Nekane; ArrÃºe, MÃ³nica; MacÃa, IvÃ¡n; Kerexeta, Jon; Muro, Naiara Breast Cancer Digital Patient Model to Capture and Visualize Real World Data published pages: , ISSN: , DOI: 10.5281/zenodo.3353629	4	2019-11-07
2019	Andrik Rampun, Karen LÃ³pez-Linares, Philip J. Morrow, Bryan W. Scotney, Hui Wang, Inmaculada Garcia OcaÃ±a, GrÃ©gory Maclair, Reyer Zwiggelaar, Miguel A. GonzÃ¡lez Ballester, IvÃ¡n MacÃa Breast pectoral muscle segmentation in mammograms using a modified holistically-nested edge detection network published pages: 1-17, ISSN: 1361-8415, DOI: 10.1016/j.media.2019.06.007	Medical Image Analysis 57	2019-11-07
2019	Larburu, Nekane; Muro, Naiara; MacÃa, IvÃ¡n DESIREE DEMO - a web-based software ecosystem for the personalized, collaborative and multidisciplinary management of primary breast cancer published pages: , ISSN: , DOI: 10.5281/zenodo.3353636	2	2019-11-07
2018	Seroussi, Brigitte; Lamy, Jean-Baptiste; Muro, Naiara; Larburu, Nekane; Sekar, Booma Devi; GuÃ©zennec, Gilles; Bouaud, Jacques Implementing Guideline-Based, Experience-Based, and Case-Based Approaches to Enrich Decision Support for the Management of Breast Cancer Patients in the DESIREE Project published pages: 190 - 194., ISSN: , DOI: 10.3233/978-1-61499-921-8-190	Volume 255: Decision Support Systems and Education, 1	2019-11-07
2018	Prebet, Coralie; Bouaud, Jacques; GuÃ©zennec, Gilles; Seroussi, Brigitte Taking into Account the Complementarity of Contemporary Breast Cancer Guidelines to Leverage Decision Support in the DESIREE Project. published pages: 755 - 759, ISSN: , DOI: 10.3233/978-1-61499-852-5-755	Volume 247: Building Continents of Knowledge in Oceans of Data: The Future of Co-Created eHealth 2	2019-11-07
2018	Bouaud, Jacques; GuÃ©zennec, Gilles; SÃ©roussi, Brigitte Combining the Generic Entity-Attribute-Value Model and Terminological Models into a Common Ontology to Enable Data Integration and Decision Support. published pages: 541 - 545, ISSN: , DOI: 10.3233/978-1-61499-852-5-541	Building Continents of Knowledge in Oceans of Data: The Future of Co-Created eHealth, 2018 1	2019-11-07
2019	Jean-Baptiste Lamy, Boomadevi Sekar, Gilles Guezennec, Jacques Bouaud, Brigitte SÃ©roussi Explainable artificial intelligence for breast cancer: A visual case-based reasoning approach published pages: 42-53, ISSN: 0933-3657, DOI: 10.1016/j.artmed.2019.01.001	Artificial Intelligence in Medicine 94	2019-11-07
2018	Booma Devi Sekar, Jean-Baptiste Lamy, Nekane Larburu, Brigitte SÃ©roussi, Gilles GuÃ©zennec, Jacques Bouaud, Naiara Muro, Hui Wang, Jun Liu Case-Based Decision Support System for Breast Cancer Management published pages: 28, ISSN: 1875-6883, DOI: 10.2991/ijcis.2018.25905180	International Journal of Computational Intelligence Systems 12/1	2019-11-07
2018	Muro Amuchastegui, Naiara; Larburu Rubio, Nekane DESIREE Project. Web-based software ecosystem for the personalized, collaborative and multidisciplinary management of primary breast cancer published pages: , ISSN: , DOI: 10.5281/zenodo.1486626	POSTER 1	2019-11-07
2019	Muro, Naiara; Larburu, Nekane; Torres, Jordi; Kerexetab, Jon; Artolab, Garazi; Arrueb, MÃ³nica; MacÃa, IvÃ¡n; SÃ©roussi, Brigitte Architecture for a Multimodal and Domain-Independent Clinical Decision Support System Software Development Kit. published pages: , ISSN: , DOI: 10.5281/zenodo.3353723	41st International Engineering in Medicine and Biology Conference (EMBC2019) 1	2019-11-07
2017	Muro, Naiara; Larburu, Nekane; Bouaud, Jacques; Seroussi, Brigitte Weighting Experience-Based Decision Support on the Basis of Clinical Outcomes\' Assessment published pages: 33 - 37, ISSN: , DOI: 10.3233/978-1-61499-824-2-33	Studies in Health Technology and Informatics, Volume 244: The Practice of Pat	2019-11-07
2018	Rampun, Andrik; Scotney, Bryan; Wang, Hui; Morrow, Philip Local Septenary Patterns for Breast Density Classification in Mammograms published pages: , ISSN: , DOI: 10.5281/zenodo.1465955	Irish Machine Vision and Image Processing 2018 (IMVIP 2018) 1	2019-11-07
2016	Macia, Ivan DESIREE Decision Support and Information System for Breast Cancer published pages: , ISSN: , DOI: 10.5281/zenodo.884173	3	2019-11-07
2017	Naiara Muro, Nekane Larburu, Jacques Bouaud, Jon Belloso, Gerardo Cajaraville, Ander Urruticoechea, Brigitte SÃ©roussi Augmenting Guideline Knowledge with Non-Compliant Clinical Decisions: Experience-Based Decision Support published pages: 217-226, ISSN: , DOI: 10.1007/978-3-319-59397-5_23	Proceedings of International Conference on Innovation in Medicine and Healthcare (KES InMed 2017), 21-23 June 2017, Vilamoura, Portugal Smart Innovation, Systems and T	2019-11-07
2017	Muro Amuchastegui, Naiara Development of an Advanced Clinical Decision Support System: Enriching the Guideline-Based Knowledge with Experience published pages: , ISSN: , DOI: 10.5281/zenodo.996210	Not part of the Proceedings 2	2019-11-07
2017	Larburu, Nekane; Muro, Naiara Advanced Clinical Decision Support Systems Beyond Clinical Guidelines published pages: , ISSN: , DOI: 10.5281/zenodo.884510	3	2019-11-07
2016	SÃ©roussi, Brigitte; Bouaud, Jacques Implementation of Decision Support Methods and Tools in the Management of Breast Cancer Patients published pages: , ISSN: , DOI: 10.5281/zenodo.884421	3	2019-11-07
2017	Andrik Rampun, Philip J. Morrow, Bryan W. Scotney, John Winder A Quantitative Study of Local Ternary Patterns for Risk Assessment in Mammography published pages: 283-286, ISSN: , DOI: 10.1007/978-3-319-59397-5_31	Proceedings of International Conference on Innovation in Medicine and Healthcare (KES InMed 2017), 21-23 June 2017, Vilamoura, Portugal Smart Innovation, Systems and T	2019-11-07
2017	Andrik Rampun, Philip Morrow, Bryan Scotney, John Winder Breast Density Classification Using Local Ternary Patterns in Mammograms published pages: 463-470, ISSN: , DOI: 10.1007/978-3-319-59876-5_51	Proceedings of 14th International Conference on Image Analysis and Recognition (ICIAR 2017), 5-7 July 2017, Montreal, Canada Lecture Notes in Computer Scien	2019-11-07
2016	Macia, Ivan Multiscale modelling and decision support applied to breast cancer management - Overview of DESIREE project published pages: , ISSN: , DOI: 10.5281/zenodo.884359	4	2019-11-07
2017	Salmon, Remi; Nguyen, Thanh Chau; Lesage, Anne-Cecile; Bass, Barbara L; Garbey, Marc Clinical study and multiscale modeling to predict the esthetic outcome of Breast Conservative Therapy published pages: , ISSN: , DOI: 10.5281/zenodo.804603	1	2019-11-07
2017	Remi Salmon, Thanh Chau Nguyen, Linda W. Moore, Barbara L. Bass, Marc Garbey Multimodal Imaging of the Breast to Retrieve the Reference State in the Absence of Gravity Using Finite Element Modeling published pages: 254-263, ISSN: , DOI: 10.1007/978-3-319-59397-5_27	Proceedings of International Conference on Innovation in Medicine and Healthcare (KES InMed 2017), 21-23 June 2017, Vilamoura, Portugal Smart Innovation, Systems and T	2019-11-07
2017	Larburu Nekane; Muro Naiara; Macia Ivan; Sanchez Eider; Wang Hui; Winder John; Bouaud Jacques; Seroussi Brigitte Augmenting Guideline-Based CDSS with Experts\' Knowledge published pages: , ISSN: , DOI: 10.5281/zenodo.802888	1	2019-11-07
2016	Salmon, Remi; Nguyen, Thanh Chau; Lesage, Anne-Cecile; Garbey, Marc Predictive Multiscale Modeling For Breast Conserving Therapy published pages: , ISSN: , DOI: 10.5281/zenodo.803986	1	2019-11-07
2017	Larburu, Nekane; Muro, Naiara Sistemas Avanzados de Soporte a la DecisiÃ³n ClÃnica mas allÃ¡ de las GuÃas ClÃnicas published pages: , ISSN: , DOI: 10.5281/zenodo.996171	1	2019-11-07
2017	Sachpazidis, Ilias; Brualla GonzÃ¡lez, Luis; RosellÃ³ Ferrando, Joan; GonzÃ¡lez Sanchis, Amparo; Droukopoulos, Andreas; Papatheodorou, Athina; AzpÃroz Puente, Marina Breast cancer normal tissue complication modelling and parameter uncertainties published pages: , ISSN: , DOI: 10.5281/zenodo.883865	Not part of the Proceedings 1	2019-11-07
2017	Andrik Rampun, Philip Morrow, Bryan Scotney, John Winder Breast Density Classification Using Multiresolution Local Quinary Patterns in Mammograms published pages: 365-376, ISSN: , DOI: 10.1007/978-3-319-60964-5_32	Proceedings of 21st Annual Conference on Medical Image Understanding and Analysis (MIUA 2017), 11 - 13 July 2017, Edinburgh, UK Communications in Computer and	2019-11-07
2016	Winder, John; Wang, Hui; Morrow, Philip; Scotney, Bryan; Maclair, Gregory; Macia, Ivan Image based breast and tumour characterization WP3 - ANALYZE published pages: , ISSN: , DOI: 10.5281/zenodo.884413	3	2019-11-07
2017	Cabo DÃez, M.; Moraga Alapont, P.; AzpÃroz Puente, M. Clinical and genetic data exploitation for the breast unit management published pages: , ISSN: , DOI: 10.5281/zenodo.996238	Not part of the Proceedings (Abstract) 3	2019-11-07
2017	Andrik Rampun, Philip J. Morrow, Bryan W. Scotney, John Winder Fully automated breast boundary and pectoral muscle segmentation in mammograms published pages: 28-41, ISSN: 0933-3657, DOI: 10.1016/j.artmed.2017.06.001	Artificial Intelligence in Medicine 79	2019-11-07
2016	Bass, Barbara L. The Clinician\'s Perspective: What do we need? published pages: , ISSN: , DOI: 10.5281/zenodo.884409	3	2019-11-07
2017	Bouaud, Jacques; Guezennec, Gilles; SÃ©roussi, Brigitte ModÃ©lisations duales d\'une ontologie et de rÃ¨gles pour la reprÃ©sentation des connaissances: application Ã la prise en charge du cancer du sein dans le projet europÃ©en DESIREE. published pages: , ISSN: , DOI: 10.5281/zenodo.997990	1	2019-11-07

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