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SOUND

Statistical multi-Omics UNDerstanding of Patient Samples

Total Cost €

EC-Contrib. €

Partnership

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Outcomes and
results

SOUND project word cloud

Explore the words cloud of the SOUND project. It provides you a very rough idea of what is the project "SOUND" about.

genetics de innovation solutions personal discovery barriers structures stage biostatisticians modular omic academic interoperable online efficient breaking scientists entry bottleneck reporting informed biology tutorials vi innovative options lower disease software quality create team ground healthcare seamless oncology lab courses developers toolkit introduce genomic training interventions barrier statistically interfaces physician publication technologies medicine samples sound developer clinical omics integration reducing rapid patient analytical medical international data reusable translating collaborative industry regular statistical commercial biggest sectors computationally standard 000s presentation treatment bioinformaticians transdisciplinary types facto interdisciplinary combination manner personalizing tools source community excellent dramatically visual multiple vii soon bioinformatic inference

Project "SOUND" data sheet

The following table provides information about the project.

Coordinator	EUROPEAN MOLECULAR BIOLOGY LABORATORY Organization address address: Meyerhofstrasse 1 city: HEIDELBERG postcode: 69117 website: http://www.embl.de contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.
Coordinator Country	Germany [DE]
Project website	http://www.sound-biomed.eu
Total cost	3˙656˙977 €
EC max contribution	2˙953˙062 € (81%)
Programme	1. H2020-EU.3.1.6. (Health care provision and integrated care)
Code Call	H2020-PHC-2014-two-stage
Funding Scheme	RIA
Starting year	2015
Duration (year-month-day)	from 2015-09-01 to 2018-08-31

Partnership

Take a look of project's partnership.

#	participants	country	role	EC contrib. [€]
1	EUROPEAN MOLECULAR BIOLOGY LABORATORY EUROPEAN MOLECULAR BIOLOGY LABORATORY Organization address address: Meyerhofstrasse 1 city: HEIDELBERG postcode: 69117 website: http://www.embl.de contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	DE (HEIDELBERG)	coordinator	650˙403.00
2	HEALTH RESEARCH INC HEALTH RESEARCH INC Organization address address: ELM AND CARLTON STREETS city: BUFFALO postcode: 14263 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	US (BUFFALO)	participant	399˙593.00
3	KLINIKUM RECHTS DER ISAR DER TECHNISCHEN UNIVERSITAT MUNCHEN KLINIKUM RECHTS DER ISAR DER TECHNISCHEN UNIVERSITAT MUNCHEN Organization address address: ISMANINGER STRASSE 22 city: MUENCHEN postcode: 81675 website: http://www.med.tu.muenchen.de contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	DE (MUENCHEN)	participant	331˙000.00
4	THE CHANCELLOR MASTERS AND SCHOLARSOF THE UNIVERSITY OF CAMBRIDGE THE CHANCELLOR MASTERS AND SCHOLARSOF THE UNIVERSITY OF CAMBRIDGE Organization address address: TRINITY LANE THE OLD SCHOOLS city: CAMBRIDGE postcode: CB2 1TN website: www.cam.ac.uk contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	UK (CAMBRIDGE)	participant	323˙261.00
5	BEDATADRIVEN BV BEDATADRIVEN BV Organization address address: BINCKHORSTLAAN 36 city: S GRAVENHAGE postcode: 2516 BE website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	NL (S GRAVENHAGE)	participant	318˙750.00
6	INSTITUTO DE ENGENHARIA MECANICA INSTITUTO DE ENGENHARIA MECANICA Organization address address: RUA ROVISCO PAIS 1 city: LISBOA postcode: 1049 001 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	PT (LISBOA)	participant	315˙928.00
7	DEUTSCHES KREBSFORSCHUNGSZENTRUM HEIDELBERG DEUTSCHES KREBSFORSCHUNGSZENTRUM HEIDELBERG Organization address address: IM NEUENHEIMER FELD 280 city: HEIDELBERG postcode: 69120 website: www.dkfz.de contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	DE (HEIDELBERG)	participant	301˙375.00
8	TECHNISCHE UNIVERSITAET MUENCHEN TECHNISCHE UNIVERSITAET MUENCHEN Organization address address: Arcisstrasse 21 city: MUENCHEN postcode: 80333 website: www.tu-muenchen.de contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	DE (MUENCHEN)	participant	274˙570.00
9	LUDWIG-MAXIMILIANS-UNIVERSITAET MUENCHEN LUDWIG-MAXIMILIANS-UNIVERSITAET MUENCHEN Organization address address: GESCHWISTER SCHOLL PLATZ 1 city: MUENCHEN postcode: 80539 website: www.uni-muenchen.de contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	DE (MUENCHEN)	participant	38˙179.00
10	EIDGENOESSISCHE TECHNISCHE HOCHSCHULE ZUERICH EIDGENOESSISCHE TECHNISCHE HOCHSCHULE ZUERICH Organization address address: Raemistrasse 101 city: ZUERICH postcode: 8092 website: https://www.ethz.ch/de.html contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	CH (ZUERICH)	participant	0.00
11	FRED HUTCHINSON CANCER RESEARCH CENTER NON PROFIT CORPORATION FRED HUTCHINSON CANCER RESEARCH CENTER NON PROFIT CORPORATION Organization address address: FAIRVIEW AVENUE 1100 city: SEATTLE WA postcode: 98109 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	US (SEATTLE WA)	participant	0.00
12	UNIVERSITAT ZURICH UNIVERSITAT ZURICH Organization address address: RAMISTRASSE 71 city: ZURICH postcode: 8006 website: n.a. contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	CH (ZURICH)	participant	0.00
13	UNIVERSITATSKLINIKUM HEIDELBERG UNIVERSITATSKLINIKUM HEIDELBERG Organization address address: IM NEUENHEIMER FELD 672 city: HEIDELBERG postcode: 69120 website: www.klinikum.uni-heidelberg.de contact info title: n.a. name: n.a. surname: n.a. function: n.a. email: n.a. telephone: n.a. fax: n.a.	DE (HEIDELBERG)	participant	0.00

Map

Project objective

Bioinformatic analysis is the biggest bottleneck in many genomic medicine projects. Our objective is to enable researchers to dramatically increase statistically informed use of personal multi-omic data in medicine. Soon, multiple types of omic technologies will be applied to 100,000s of patient-derived samples, with the three-stage goal of better understanding disease biology, discovery of new interventions, and personalizing the choice of treatment options. Our interdisciplinary team of biostatisticians, bioinformaticians, software developers and physician-scientists will address the analysis bottleneck with statistically and computationally sound methods. The SOUND consortium will (i) develop widely used and excellent bioinformatic and statistical methods and open source software for common but challenging tasks, including data pre-processing, data integration, statistical inference, visual presentation, and publication-quality reporting; (ii) introduce novel approaches to ground breaking multi-omics applications in oncology and medical genetics; (iii) develop interoperable data structures and software interfaces that enable seamless combination of tools; (iv) support a collaborative international academic and industry developer community; (v) enable rapid development and execution of high-quality software; (vi) lower the barrier to entry into this transdisciplinary field by providing simple, robust, easy-to-use solutions; and (vii) develop a training programme with regular courses and comprehensive online tutorials. Our aim is to create the de facto standard toolkit used in every clinical research lab for statistically informed analysis of personal multi-omic data. SOUND will increase research and innovation opportunities by reducing barriers of entry to genomic medicine across academic, healthcare and commercial sectors by translating in a rapid and efficient manner complex and innovative analytical approaches into modular, interoperable, reusable applications.

Deliverables

List of deliverables.
Technical report on existing and novel methods	Documents, reports	2019-10-10 13:00:29
Technical report describing the design of re-capture platform for deep sequencing and validation	Documents, reports	2019-10-10 13:00:28
Technical report and software for predictive modelling of drug response and detection of outlier samples	Other	2019-10-10 13:00:28
Technical report on biomarkers analysed with transcriptome and metabolome data and technical report on novel pathomechanisms	Documents, reports	2019-10-10 13:00:28
Open-source software to estimate structured sparse models from multi-omics data	Other	2019-10-10 13:00:29
Website of InteractiveReports for select outcomes of WP2, 5-7.	Websites, patent fillings, videos etc.	2019-10-10 13:00:28
Technical report on disease classification based on multilevel data integration	Documents, reports	2019-10-10 13:00:28
Open-source software CAUSAMET and BIOMARK	Other	2019-10-10 13:00:29
Open-source software implementing InteractiveReports and catalogue of standard templates.	Other	2019-10-10 13:00:28
Open-source software that implements tumour diversity time series analysis	Other	2019-10-10 13:00:28
Open-source software implementing end-to-end analysis and integrating the results from T1.1-1.5	Other	2019-10-10 13:00:29
Technical report with evaluation of performance improvement or regression from D9.2	Documents, reports	2019-10-10 13:00:28
SOUNDData and SOUNDHub public data resources	Websites, patent fillings, videos etc.	2019-10-10 13:00:28
White paper description software design principles and open-source software implementation of SOUNDHub and SOUNDData.	Documents, reports	2019-10-10 13:00:28
Open-source software to implement causal stability ranking for high-dimensional genotype data	Other	2019-10-10 13:00:28
Open-source software CAUSEXPR, to prioritize likely causal mutations from genotype and gene expression	Other	2019-10-10 13:00:28
Technical report on approaches to outlier detection in patient â€™omics data	Documents, reports	2019-10-10 13:00:28
Technical report with best practice guidelines and software package	Documents, reports	2019-10-10 13:00:28
Technical report describing the data structure and methods for operating on screening data, as described in T1.1	Documents, reports	2019-10-10 13:00:28
Technical report on new disease entities that were identified using novel statistical methods	Documents, reports	2019-10-10 13:00:27
Software supporting the molecular tumour characterization pipeline and predicting perturbed pathways	Other	2019-10-10 13:00:27
Open-source software with updated Renjin and code library of benchmarks and technical report describing most significant performance bottlenecks	Other	2019-10-10 13:00:27
Open-source software for the standardized application of existing methods in liquid biopsy data analysis	Other	2019-10-10 13:00:28
Software package for automated benchmarking	Other	2019-10-10 13:00:28

Take a look to the deliverables list in detail: detailed list of SOUND deliverables.

Publications

List of publications.
year	authors and title	journal	last update
2018	Zhiwen Xu, Wing-Sze Lo, David B. Beck, Luise A. Schuch, Monika OlÃ¡hovÃ¡, Robert Kopajtich, Yeeting E. Chong, Charlotte L. Alston, Elias Seidl, Liting Zhai, Ching-Fun Lau, Donna Timchak, Charles A. LeDuc, Alain C. Borczuk, Andrew F. Teich, Jane Juusola, Christina Sofeso, Christoph MÃ¼ller, Germaine Pierre, Tom Hilliard, Peter D. Turnpenny, Matias Wagner, Matthias Kappler, Frank Brasch, John Paul Bouffard, Leslie A. Nangle, Xiang-Lei Yang, Mingjie Zhang, Robert W. Taylor, Holger Prokisch, Matthias Griese, Wendy K. Chung, Paul Schimmel Bi-allelic Mutations in Phe-tRNA Synthetase Associated with a Multi-system Pulmonary Disease Support Non-translational Function published pages: 100-114, ISSN: 0002-9297, DOI: 10.1016/j.ajhg.2018.06.006	The American Journal of Human Genetics 103/1	2019-10-10
2017	Laura S. Kremer, Daniel M. Bader, Christian Mertes, Robert Kopajtich, Garwin Pichler, Arcangela Iuso, Tobias B. Haack, Elisabeth Graf, Thomas Schwarzmayr, Caterina Terrile, EliÅ¡ka KoÅˆaÅ™ÃkovÃ¡, Birgit Repp, Gabi KastenmÃ¼ller, Jerzy Adamski, Peter Lichtner, Christoph Leonhardt, Benoit Funalot, Alice Donati, Valeria Tiranti, Anne Lombes, Claude Jardel, Dieter GlÃ¤ser, Robert W. Taylor, Daniele Ghezzi, Johannes A. Mayr, Agnes RÃ¶tig, Peter Freisinger, Felix Distelmaier, Tim M. Strom, Thomas Meitinger, Julien Gagneur, Holger Prokisch Genetic diagnosis of Mendelian disorders via RNA sequencing published pages: 15824, ISSN: 2041-1723, DOI: 10.1038/ncomms15824	Nature Communications 8	2019-10-10
2018	Georg Stricker, Mathilde Galinier, Julien Gagneur GenoGAM 2.0: scalable and efficient implementation of genome-wide generalized additive models for gigabase-scale genomes published pages: , ISSN: 1471-2105, DOI: 10.1186/s12859-018-2238-7	BMC Bioinformatics 19/1	2019-10-10
2018	Ricard Argelaguet, Britta Velten, Damien Arnol, Sascha Dietrich, Thorsten Zenz, John C Marioni, Florian Buettner, Wolfgang Huber, Oliver Stegle Multiâ€Omics Factor Analysisâ€”a framework for unsupervised integration of multiâ€omics data sets published pages: e8124, ISSN: 1744-4292, DOI: 10.15252/msb.20178124	Molecular Systems Biology 14/6	2019-10-10
2018	AndrÃ© VerÃssimo, Eunice Carrasquinha, Marta B. Lopes, Arlindo L. Oliveira, Marie-France Sagot, Susana Vinga Sparse network-based regularization for the analysis of patientomics high-dimensional survival data published pages: , ISSN: , DOI:		2019-10-10
2018	Birgit M. Repp, Elisa Mastantuono, Charlotte L. Alston, Manuel Schiff, Tobias B. Haack, Agnes RÃ¶tig, Anna Ardissone, Anne LombÃ¨s, Claudia B. Catarino, Daria Diodato, Gudrun Schottmann, Joanna Poulton, Alberto Burlina, An Jonckheere, Arnold Munnich, Boris Rolinski, Daniele Ghezzi, Dariusz Rokicki, Diana Wellesley, Diego Martinelli, Ding Wenhong, Eleonora Lamantea, Elsebet Ostergaard, Ewa Pronicka, Germaine Pierre, Hubert J. M. Smeets, Ilka Wittig, Ingrid Scurr, Irenaeus F. M. de Coo, Isabella Moroni, JoÃ©l Smet, Johannes A. Mayr, Lifang Dai, Linda de Meirleir, Markus Schuelke, Massimo Zeviani, Raphael J. Morscher, Robert McFarland, Sara Seneca, Thomas Klopstock, Thomas Meitinger, Thomas Wieland, Tim M. Strom, Ulrike Herberg, Uwe Ahting, Wolfgang Sperl, Marie-Cecile Nassogne, Han Ling, Fang Fang, Peter Freisinger, Rudy Van Coster, Valentina Strecker, Robert W. Taylor, Johannes HÃ¤berle, Jerry Vockley, Holger Prokisch, Saskia Wortmann Clinical, biochemical and genetic spectrum of 70 patients with ACAD9 deficiency: is riboflavin supplementation effective? published pages: , ISSN: 1750-1172, DOI: 10.1186/s13023-018-0784-8	Orphanet Journal of Rare Diseases 13/1	2019-10-10
2018	Felix Brechtmann, Agne Matuseviciute, Christian Mertes, Vicente A Yepez, Ziga Avsec, Maximilian Herzog, Daniel Magnus Bader, Holger Prokisch, Julien Gagneur OUTRIDER: A statistical method for detecting aberrantly expressed genes in RNA sequencing data published pages: , ISSN: , DOI: 10.1101/322149	bioRxiv	2019-10-10
2018	Sarah Louise Stenton, Holger Prokisch Advancing genomic approaches to the molecular diagnosis of mitochondrial disease published pages: 399-408, ISSN: 0071-1365, DOI: 10.1042/EBC20170110	Essays In Biochemistry 62/3	2019-10-10
2018	Marta B. Lopes, AndrÃ© VerÃssimo, Eunice Carrasquinha, Sandra Casimiro, Niko Beerenwinkel, Susana Vinga Ensemble outlier detection and gene selection in triple-negative breast cancer data published pages: , ISSN: 1471-2105, DOI: 10.1186/s12859-018-2149-7	BMC Bioinformatics 19/1	2019-10-10
2018	Pieter Segaert, Marta B Lopes, Sandra Casimiro, Susana Vinga, Peter J Rousseeuw Robust identification of target genes and outliers in triple-negative breast cancer data published pages: 96228021879472, ISSN: 0962-2802, DOI: 10.1177/0962280218794722	Statistical Methods in Medical Research	2019-10-10
2018	Vicente A. YÃ©pez, Laura S. Kremer, Arcangela Iuso, Mirjana Gusic, Robert Kopajtich, EliÅ¡ka KoÅˆaÅ™ÃkovÃ¡, Agnieszka Nadel, Leonhard Wachutka, Holger Prokisch, Julien Gagneur OCR-Stats: Robust estimation and statistical testing of mitochondrial respiration activities using Seahorse XF Analyzer published pages: e0199938, ISSN: 1932-6203, DOI: 10.1371/journal.pone.0199938	PLOS ONE 13/7	2019-10-10
2017	RenÃ© G. Feichtinger, Monika OlÃ¡hovÃ¡, Yoshihito Kishita, Caterina Garone, Laura S. Kremer, Mikako Yagi, Takeshi Uchiumi, Alexis A. Jourdain, Kyle Thompson, Aaron R. Dâ€™Souza, Robert Kopajtich, Charlotte L. Alston, Johannes Koch, Wolfgang Sperl, Elisa Mastantuono, Tim M. Strom, Saskia B. Wortmann, Thomas Meitinger, Germaine Pierre, Patrick F. Chinnery, Zofia M. Chrzanowska-Lightowlers, Robert N. Lightowlers, Salvatore DiMauro, Sarah E. Calvo, Vamsi K. Mootha, Maurizio Moggio, Monica Sciacco, Giacomo P. Comi, Dario Ronchi, Kei Murayama, Akira Ohtake, Pedro Rebelo-Guiomar, Masakazu Kohda, Dongchon Kang, Johannes A. Mayr, Robert W. Taylor, Yasushi Okazaki, Michal Minczuk, Holger Prokisch Biallelic C1QBP Mutations Cause Severe Neonatal-, Childhood-, or Later-Onset Cardiomyopathy Associated with Combined Respiratory-Chain Deficiencies published pages: 525-538, ISSN: 0002-9297, DOI: 10.1016/j.ajhg.2017.08.015	The American Journal of Human Genetics 101/4	2019-10-10
2018	Eunice Carrasquinha, AndrÃ© VerÃssimo, Susana Vinga Consensus outlier detection in survival analysis using the rank product test published pages: , ISSN: , DOI: 10.1101/421917		2019-10-10
2018	Miroslav P Milev, Claudio Graziano, Daniela Karall, Willemijn F E Kuper, Noraldin Al-Deri, Duccio Maria Cordelli, Tobias B Haack, Katharina Danhauser, Arcangela Iuso, Flavia Palombo, Tommaso Pippucci, Holger Prokisch, Djenann Saint-Dic, Marco Seri, Daniela Stanga, Giovanna Cenacchi, Koen L I van Gassen, Johannes Zschocke, Christine Fauth, Johannes A Mayr, Michael Sacher, Peter M van Hasselt Bi-allelic mutations in TRAPPC2L result in a neurodevelopmental disorder and have an impact on RAB11 in fibroblasts published pages: jmedgenet-2018-1, ISSN: 0022-2593, DOI: 10.1136/jmedgenet-2018-105441	Journal of Medical Genetics	2019-10-10
2018	Arcangela Iuso, Marit Wiersma, Hans-Joachim SchÃ¼ller, Ben Pode-Shakked, Dina Marek-Yagel, Mathias Grigat, Thomas Schwarzmayr, Riccardo Berutti, Bader Alhaddad, Bart Kanon, Nicola A. Grzeschik, JÃ¼rgen G. Okun, Zeev Perles, Yishay Salem, Ortal Barel, Amir Vardi, Marina Rubinshtein, Tal Tirosh, Gal Dubnov-Raz, Ana C. Messias, Caterina Terrile, Iris Barshack, Alex Volkov, Camilla Avivi, Eran Eyal, Elisa Mastantuono, Muhamad Kumbar, Shachar Abudi, Matthias Braunisch, Tim M. Strom, Thomas Meitinger, Georg F. Hoffmann, Holger Prokisch, Tobias B. Haack, Bianca J.J.M. Brundel, Dorothea Haas, Ody C.M. Sibon, Yair Anikster Mutations in PPCS , Encoding Phosphopantothenoylcysteine Synthetase, Cause Autosomal-Recessive Dilated Cardiomyopathy published pages: 1018-1030, ISSN: 0002-9297, DOI: 10.1016/j.ajhg.2018.03.022	The American Journal of Human Genetics 102/6	2019-10-10
2018	Dongxue Wang, Basak Eraslan, Thomas Wieland, Bjorn M Hallstrom, Thomas Hopf, Daniel Paul Zolg, Jana Zecha, Anna Asplund, Li-hua Li, Chen Meng, Martin Frejno, Tobias Schmidt, Karsten Schnatbaum, Mathias Wilhelm, Fredrik Ponten, Mathias Uhlen, Julien Gagneur, Hannes Hahne, Bernhard Kuster A deep proteome and transcriptome abundance atlas of 29 healthy human tissues published pages: , ISSN: , DOI: 10.1101/357137	bioRxiv	2019-10-10
2018	Eunice Carrasquinha, AndrÃ© VerÃssimo, Marta B. Lopes, Susana Vinga Identification of influential observations in high-dimensional cancer survival data through the rank product test published pages: , ISSN: 1756-0381, DOI: 10.1186/s13040-018-0162-z	BioData Mining 11/1	2019-10-10
2018	Sascha Dietrich, MaÅ‚gorzata OleÅ›, Junyan Lu, Leopold Sellner, Simon Anders, Britta Velten, Bian Wu, Jennifer HÃ¼llein, Michelle da Silva Liberio, Tatjana Walther, Lena Wagner, Sophie Rabe, Sonja Ghidelli-Disse, Marcus Bantscheff, Andrzej K. OleÅ›, MikoÅ‚aj SÅ‚abicki, Andreas Mock, Christopher C. Oakes, Shihui Wang, Sina Oppermann, Marina Lukas, Vladislav Kim, Martin Sill, Axel Benner, Anna Jauch, Lesley Ann Sutton, Emma Young, Richard Rosenquist, Xiyang Liu, Alexander Jethwa, Kwang Seok Lee, Joe Lewis, Kerstin Putzker, Christoph Lutz, Davide Rossi, Andriy Mokhir, Thomas Oellerich, Katja Zirlik, Marco Herling, Florence Nguyen-Khac, Christoph Plass, Emma Andersson, Satu Mustjoki, Christof von Kalle, Anthony D. Ho, Manfred Hensel, Jan DÃ¼rig, Ingo Ringshausen, Marc Zapatka, Wolfgang Huber, Thorsten Zenz Drug-perturbation-based stratification of blood cancer published pages: 427-445, ISSN: 0021-9738, DOI: 10.1172/JCI93801	Journal of Clinical Investigation 128/1	2019-10-10
2018	Laura S. Kremer, Saskia B. Wortmann, Holger Prokisch â€œTranscriptomicsâ€: molecular diagnosis of inborn errors of metabolism via RNA-sequencing published pages: 525-532, ISSN: 0141-8955, DOI: 10.1007/s10545-017-0133-4	Journal of Inherited Metabolic Disease 41/3	2019-10-10
2017	Ruth I. C. Glasgow, Kyle Thompson, InÃªs A. Barbosa, Langping He, Charlotte L. Alston, Charu Deshpande, Michael A. Simpson, Andrew A. M. Morris, Axel Neu, Ulrike LÃ¶bel, Julie Hall, Holger Prokisch, Tobias B. Haack, Maja Hempel, Robert McFarland, Robert W. Taylor Novel GFM2 variants associated with early-onset neurological presentations of mitochondrial disease and impaired expression of OXPHOS subunits published pages: 227-235, ISSN: 1364-6745, DOI: 10.1007/s10048-017-0526-4	neurogenetics 18/4	2019-10-10
2018	Basak Eraslan, Dongxue Wang, Mirjana Gusic, Holger Prokisch, Bjorn M Hallstrom, Mathias Uhlen, Anna Asplund, Fredrik Ponten, Thomas Wieland, Thomas Hopf, Hannes Hahne, Bernhard Kuster, Julien Gagneur Quantification and discovery of sequence determinants of protein per mRNA amount in 29 human tissues published pages: , ISSN: , DOI: 10.1101/353763	bioRxiv	2019-10-10
2018	Christos Dimitrakopoulos, Sravanth Kumar Hindupur, Luca HÃ¤fliger, Jonas Behr, Hesam Montazeri, Michael N Hall, Niko Beerenwinkel Network-based integration of multi-omics data for prioritizing cancer genes published pages: 2441-2448, ISSN: 1367-4803, DOI: 10.1093/bioinformatics/bty148	Bioinformatics 34/14	2019-10-10
2016	Solaimani P., Kallen M., Bertram A. Using R language based bioinformatic workflows as PaaS published pages: , ISSN: , DOI: 10.7490/f1000research.1113288.1	F1000Research	2019-10-10
2016	Thomas Thurnherr, Franziska Singer, Daniel J. Stekhoven, Niko Beerenwinkel Genomic variant annotation workflow for clinical applications published pages: 1963, ISSN: 2046-1402, DOI: 10.12688/f1000research.9357.2	F1000Research 5	2019-10-10
2016	Lindsey Van Haute, Sabine Dietmann, Laura Kremer, Shobbir Hussain, Sarah F. Pearce, Christopher A. Powell, Joanna Rorbach, Rebecca Lantaff, Sandra Blanco, Sascha Sauer, Urania Kotzaeridou, Georg F. Hoffmann, Yasin Memari, Anja Kolb-Kokocinski, Richard Durbin, Johannes A. Mayr, Michaela Frye, Holger Prokisch, Michal Minczuk Deficient methylation and formylation of mt-tRNAMet wobble cytosine in a patient carrying mutations in NSUN3 published pages: 12039, ISSN: 2041-1723, DOI: 10.1038/ncomms12039	Nature Communications 7	2019-10-10
2017	Ariane L. Hofmann, Jonas Behr, Jochen Singer, Jack Kuipers, Christian Beisel, Peter Schraml, Holger Moch, Niko Beerenwinkel Detailed simulation of cancer exome sequencing data reveals differences and common limitations of variant callers published pages: , ISSN: 1471-2105, DOI: 10.1186/s12859-016-1417-7	BMC Bioinformatics 18/1	2019-10-10
2017	Georg Stricker, Alexander Engelhardt, Daniel Schulz, Matthias Schmid, Achim Tresch, Julien Gagneur GenoGAM: genome-wide generalized additive models for ChIP-Seq analysis published pages: , ISSN: 1367-4803, DOI: 10.1093/bioinformatics/btx150	Bioinformatics	2019-10-10
2016	AndrÃ© VerÃssimo, Arlindo Limede Oliveira, Marie-France Sagot, Susana Vinga DegreeCox â€“ a network-based regularization method for survival analysis published pages: , ISSN: 1471-2105, DOI: 10.1186/s12859-016-1310-4	BMC Bioinformatics 17/S16	2019-10-10
2016	Laura S Kremer, View ORCID ProfileDaniel M Bader, Christian Mertes, Robert Kopajtich, Garwin Pichler, Arcangela Iuso, Tobias B Haack, Elisabeth Graf, Thomas Schwarzmayr, Caterina Terrile, Eliska Konafikova, Birgit Repp, Gabi KastenmÃ¼ller, Jerzy Adamski, Peter Lichtner, Christoph Leonhardt, Benoit Funalot, Alice Donati, Valeria Tiranti, Anne Lombes, Claude Jardel, Dieter GlÃ¤ser, Robert W Taylor, Daniele Ghezzi, Johannes A Mayr, Agnes RÃ¶tig, Peter Freisinger, Felix Distelmaier, Tim M Strom, Thomas Meitinger, Julien Gagneur, Holger Prokisch Genetic diagnosis of Mendelian disorders via RNA sequencing published pages: , ISSN: , DOI: 10.1101/066738		2019-10-10
2016	Robert Kopajtich, Kei Murayama, AndreasÂ R. Janecke, TobiasÂ B. Haack, Maximilian Breuer, A.S. Knisely, Inga Harting, Toya Ohashi, Yasushi Okazaki, Daisaku Watanabe, Yoshimi Tokuzawa, Urania Kotzaeridou, Stefan KÃ¶lker, Sven Sauer, Matthias Carl, Simon Straub, Andreas Entenmann, Elke Gizewski, RenÃ©Â G. Feichtinger, JohannesÂ A. Mayr, Karoline Lackner, TimÂ M. Strom, Thomas Meitinger, Thomas MÃ¼ller, Akira Ohtake, GeorgÂ F. Hoffmann, Holger Prokisch, Christian Staufner Biallelic IARS Mutations Cause Growth Retardation with Prenatal Onset, Intellectual Disability, Muscular Hypotonia, and Infantile Hepatopathy published pages: 414-422, ISSN: 0002-9297, DOI: 10.1016/j.ajhg.2016.05.027	The American Journal of Human Genetics 99/2	2019-10-10
2017	Elson TomÃ¡s, Susana Vinga, Alexandra M. Carvalho Unsupervised learning of pharmacokinetic responses published pages: , ISSN: 0943-4062, DOI: 10.1007/s00180-016-0707-x	Computational Statistics	2019-10-10
2017	Samira Ait-El-Mkadem, Manal Dayem-Quere, Mirjana Gusic, Annabelle Chaussenot, Sylvie Bannwarth, BÃ©rengÃ¨re FranÃ§ois, Emmanuelle C. Genin, Konstantina Fragaki, Catharina L.M. Volker-Touw, Christelle Vasnier, ValÃ©rie Serre, Koen L.I. van Gassen, FranÃ§oise Lespinasse, Susan Richter, Graeme Eisenhofer, CÃ©cile Rouzier, Fanny Mochel, Anne De Saint-Martin, Marie-ThÃ©rÃ¨se Abi Warde, Monique G.M. de Sain-van der Velde, Judith J.M. Jans, Jeanne Amiel, Ziga Avsec, Christian Mertes, Tobias B. Haack, Tim Strom, Thomas Meitinger, Penelope E. Bonnen, Robert W. Taylor, Julien Gagneur, Peter M. van Hasselt, AgnÃ¨s RÃ¶tig, AgnÃ¨s Delahodde, Holger Prokisch, Sabine A. Fuchs, VÃ©ronique Paquis-Flucklinger Mutations in MDH2, Encoding a Krebs Cycle Enzyme, Cause Early-Onset Severe Encephalopathy published pages: 151-159, ISSN: 0002-9297, DOI: 10.1016/j.ajhg.2016.11.014	The American Journal of Human Genetics 100/1	2019-10-10

Are you the coordinator (or a participant) of this project? Plaese send me more information about the "SOUND" project.

For instance: the website url (it has not provided by EU-opendata yet), the logo, a more detailed description of the project (in plain text as a rtf file or a word file), some pictures (as picture files, not embedded into any word file), twitter account, linkedin page, etc.

Send me an email (fabio@fabiodisconzi.com) and I put them in your project's page as son as possible.

Thanks. And then put a link of this page into your project's website.

The information about "SOUND" are provided by the European Opendata Portal: CORDIS opendata.