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MICRORULES SIGNED

Structural and Functional Architectures of Multi-Kingdom Microbial Consortia Colonizing Plant Roots

Total Cost €

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EC-Contrib. €

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Partnership

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 MICRORULES project word cloud

Explore the words cloud of the MICRORULES project. It provides you a very rough idea of what is the project "MICRORULES" about.

kingdom    forming    community    host    connectivity    colonized    mycorrhizal    diversity    settings    independently    healthy    subsequent    fungal    despite    mechanisms    rhizobacterium    binary    vitro    collections    fundamental    investigations    interpretation    profiling    genetically    functions    laboratory    holo    poorly    innovative    natural    rules    beneficial    roots    oomycetes    microbial    tripartite    plants    maintaining    framework    transition    applies    structuring    populations    molecular    hypothesis    functional    metatranscriptome    dissect    structure    colonization    group    synthetic    arabidopsis    reductionist    culture    plant    establishing    microbiome    endophyte    fungi    microbiota    communities    interaction    model    multitrophic    extensive    assembly    networks    health    genes    generate    integral    root    interactions    conceptual    thaliana    profiles    balance    productivity    basis    microbe    underlying    reconstitution    reference    reconstitute    underpin    bacteria    members    utilize    classes    play    functionally    tractable    corresponding    genome    microbes   

Project "MICRORULES" data sheet

The following table provides information about the project.

Coordinator
MAX-PLANCK-GESELLSCHAFT ZUR FORDERUNG DER WISSENSCHAFTEN EV 

Organization address
address: HOFGARTENSTRASSE 8
city: Munich
postcode: 80539
website: www.mpg.de

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Germany [DE]
 Total cost 1˙497˙547 €
 EC max contribution 1˙497˙547 € (100%)
 Programme 1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
 Code Call ERC-2017-STG
 Funding Scheme ERC-STG
 Starting year 2017
 Duration (year-month-day) from 2017-09-01   to  2022-08-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    MAX-PLANCK-GESELLSCHAFT ZUR FORDERUNG DER WISSENSCHAFTEN EV DE (Munich) coordinator 1˙497˙547.00

Map

 Project objective

The roots of healthy plants are colonized by a rich diversity of microbes, forming multi-kingdom microbial consortia that impact plant productivity. Despite the expected high connectivity between root microbiota members, our understanding of microbe-microbe interactions in structuring microbial networks in plant roots as well as their functional impact on plant growth remains poorly understood. Based on recent findings in my group, I propose a conceptual framework aiming at a functional understanding the holo-plant microbiome, where microbial interactions play an integral role in structuring root-associated microbial communities and maintaining microbiota balance and plant health. By profiling three independently-evolved microbial classes (bacteria, fungi, oomycetes) in the roots of natural Arabidopsis thaliana populations across Europe and establishing corresponding reference culture collections for subsequent reconstitution of the plant microbiota in vitro, I will define fundamental mechanisms underlying the structure and functions of the plant microbiota. I will generate and utilize extensive microbial genome resources for the interpretation of metatranscriptome profiles of multi-kingdom synthetic communities during root colonization. This will contribute to a transition from binary plant-microbe to community-level molecular investigations. Finally, using a genetically tractable tripartite interaction model between the non mycorrhizal plant A. thaliana, a beneficial fungal root endophyte and a rhizobacterium, I propose to functionally dissect the molecular basis of beneficial multitrophic plant-microbe interactions by identifying microbial genes that are essential for both microbe-microbe and microbe-host interactions. My hypothesis-driven research applies innovative reductionist approaches to reconstitute the microbiota of plant roots in laboratory settings to identify fundamental assembly rules and mechanisms that underpin complex plant-microbe interactions.

 Publications

year authors and title journal last update
List of publications.
2020 Thorsten Thiergart, Paloma Durán, Thomas Ellis, Nathan Vannier, Ruben Garrido-Oter, Eric Kemen, Fabrice Roux, Carlos Alonso-Blanco, Jon Ågren, Paul Schulze-Lefert, Stéphane Hacquard
Root microbiota assembly and adaptive differentiation among European Arabidopsis populations
published pages: 122-131, ISSN: 2397-334X, DOI: 10.1038/s41559-019-1063-3
Nature Ecology & Evolution 4/1 2020-03-23
2019 Felix Getzke, Thorsten Thiergart, Stéphane Hacquard
Contribution of bacterial-fungal balance to plant and animal health
published pages: 66-72, ISSN: 1369-5274, DOI: 10.1016/j.mib.2019.10.009
Current Opinion in Microbiology 49 2020-03-23
2018 M. Amine Hassani, Paloma Durán, Stéphane Hacquard
Microbial interactions within the plant holobiont
published pages: , ISSN: 2049-2618, DOI: 10.1186/s40168-018-0445-0
Microbiome 6/1 2019-05-27
2018 Paloma Durán, Thorsten Thiergart, Ruben Garrido-Oter, Matthew Agler, Eric Kemen, Paul Schulze-Lefert, Stéphane Hacquard
Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival
published pages: 973-983.e14, ISSN: 0092-8674, DOI: 10.1016/j.cell.2018.10.020
Cell 175/4 2019-05-23
2018 Aurélie Deveau, Gregory Bonito, Jessie Uehling, Mathieu Paoletti, Matthias Becker, Saskia Bindschedler, Stéphane Hacquard, Vincent Hervé, Jessy Labbé, Olga A Lastovetsky, Sophie Mieszkin, Larry J Millet, Balázs Vajna, Pilar Junier, Paola Bonfante, Bastiaan P Krom, Stefan Olsson, Jan Dirk van Elsas, Lukas Y Wick
Bacterial–fungal interactions: ecology, mechanisms and challenges
published pages: 335-352, ISSN: 1574-6976, DOI: 10.1093/femsre/fuy008
FEMS Microbiology Reviews 42/3 2019-06-06

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