PROMOS
Probabilistic Models in Pseudo-Euclidean Spaces
| Coordinatore | THE UNIVERSITY OF BIRMINGHAM
Organization address
address: Edgbaston contact info |
| Nazionalità Coordinatore | United Kingdom [UK] |
| Totale costo | 221˙606 € |
| EC contributo | 221˙606 € |
| Programma | FP7-PEOPLE
Specific programme "People" implementing the Seventh Framework Programme of the European Community for research, technological development and demonstration activities (2007 to 2013) |
| Code Call | FP7-PEOPLE-2012-IEF |
| Funding Scheme | MC-IEF |
| Anno di inizio | 2014 |
| Periodo (anno-mese-giorno) | 2014-01-02 - 2016-04-02 |
Partecipanti
| # | ||||
|---|---|---|---|---|
| 1 |
THE UNIVERSITY OF BIRMINGHAM
Organization address
address: Edgbaston contact info |
UK (BIRMINGHAM) | coordinator | 221˙606.40 |
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Obiettivo del progetto (Objective)
'Biological sequence databases are a core source of information in the life sciences and have nowadays grown to multiple thousand entries. Classically, a query of a sequence to such a database requires the comparison of the query to each entry using an alignment algorithm, like fasta, smith-Waterman or blast. Many realtime and high-througput experiments rely on a quick identification of the query to decide the next steps in the experimental pipeline and are currently slown down by the costs of the classical retrieval systems. The main objective of this proposal is to provide quick large-scale identification algorithms in non-metric spaces, induced by the scoring functions for sequence-alignments. Thereby, the proposal aims on techniques which avoid the full calculations of the scorings during training and retrieval, employing different mathematical and probabilistic approximation techniques.'