SKINTERMINOMICS

Matrix metalloproteinase degradomics at the epidermal-dermal interface

Coordinatore	EIDGENOESSISCHE TECHNISCHE HOCHSCHULE ZURICH    more  Organization address address: Raemistrasse 101 city: ZUERICH postcode: 8092 contact info Titolo: Prof. Nome: Sabine Cognome: Werner Email: send email Telefono: -6333944 Fax: -6331177
Nazionalità Coordinatore	Switzerland [CH]
Totale costo	75˙000 €
EC contributo	75˙000 €
Programma	FP7-PEOPLE Specific programme "People" implementing the Seventh Framework Programme of the European Community for research, technological development and demonstration activities (2007 to 2013)
Code Call	FP7-PEOPLE-2010-RG
Funding Scheme	MC-IRG
Anno di inizio	2010
Periodo (anno-mese-giorno)	2010-11-01   -   2013-10-31

 Partecipanti

#	participant	country	role	EC contrib. [€]
1	EIDGENOESSISCHE TECHNISCHE HOCHSCHULE ZURICH  Organization address address: Raemistrasse 101 city: ZUERICH postcode: 8092 contact info Titolo: Prof. Nome: Sabine Cognome: Werner Email: send email Telefono: -6333944 Fax: -6331177	CH (ZUERICH)	coordinator	75˙000.00

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 Obiettivo del progetto (Objective)

'Matrix metalloproteinases (MMPs) regulate processes within the dermal and the epidermal compartments and particularly at the epidermal – dermal interface. This is of crucial importance for wound repair and also for the pathogenesis of skin cancer. One member of the MMP family - MMP-10 - gained particular interest, since it is specifically expressed at the leading edge of hyperproliferative keratinocytes in wounds and in skin tumors. The key to unravel the mechanism of MMP-10 action is the system-wide identification of its substrates under physiological and pathological conditions. To do so, we will use Terminal Amine Isotopic Labeling of Substrates (TAILS), a novel iTRAQ-based quantitative proteomic technique for the multiplex system-wide discovery of protease substrates and their cleavage sites. We will apply TAILS to identify novel bioactive MMP-10 substrates in vitro using primary keratinocytes from wild-type and MMP-10 knockout mice and from fibroblasts grown in mono- or co-culture. Thereby, we will employ 4plex-iTRAQ-TAILS to define both MMP-10 substrates and their cell type-specific origin in a single experiment. In addition, we will use TAILS to examine N-terminome changes during chemically-induced skin carcinogenesis in wild-type and MMP-10 deficient animals. This approach will allow to identify MMP-10 in vivo substrates but also to monitor the generation of neo-N-termini in wild-type controls at each important step of skin carcinogenesis in an unbiased manner. Cleavage site specificities will relate these to potential protease pools that will be defined from concomitant expression analysis using a dedicated protease microarray, the CLIP-CHIP(TM). Proteases, in particular MMPs, which are highly expressed during skin carcinogenesis, will be further analyzed for their substrates by iTRAQ-TAILS. These experiments will provide new insight into the role of proteases, including matrix metalloproteinases, in non-melanoma skin cancer development and progression.'

Introduzione (Teaser)

EU-funded researchers have modified a mass spectrometry-based technology called terminal amine isotopic labelling of substrates (TAILS) to study the matrix metalloproteinase (MMP)-10 enzyme.