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CVI_ADAPT SIGNED

Unraveling the history of adaptation in an island model: Cape Verde Arabidopsis

Total Cost €

0

EC-Contrib. €

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Partnership

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 CVI_ADAPT project word cloud

Explore the words cloud of the CVI_ADAPT project. It provides you a very rough idea of what is the project "CVI_ADAPT" about.

reconstruct    genome    combine    genetics    species    uncover    pivotal    isolation    context    tractable    populations    mode    exceptional    toolkit    natural    collection    evolutionary    thaliana    predict    verde    biological    adaptive    dynamics    ago    diverse    epistasis    divergence    employs    region    fundamental    explicit    played    cress    laboratories    environmental    sequencing    area    affordable    mapping    opportunity    theory    island    population    remarkable    longer    editing    wealth    outcomes    trait    uncomplicated    darwin    nature    trajectories    functional    technologies    ecologically    edge    historical    complexity    powerful    principles    individual    genetic    cape    arabidopsis    impacted    crispr    comprehensively    tools    modeling    samples    thale    phenotypic    history    primary    roadmap    first    variants    networks    wallace    intriguing    fluctuations    decipher    mechanisms    islands    single    synthesizing    revealed    enigma    microcosms    tempo    collected    monitoring    pleiotropy    launches    manipulation   

Project "CVI_ADAPT" data sheet

The following table provides information about the project.

Coordinator
MAX-PLANCK-GESELLSCHAFT ZUR FORDERUNG DER WISSENSCHAFTEN EV 

Organization address
address: HOFGARTENSTRASSE 8
city: Munich
postcode: 80539
website: www.mpg.de

contact info
title: n.a.
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surname: n.a.
function: n.a.
email: n.a.
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 Coordinator Country Germany [DE]
 Total cost 1˙609˙375 €
 EC max contribution 1˙609˙375 € (100%)
 Programme 1. H2020-EU.1.1. (EXCELLENT SCIENCE - European Research Council (ERC))
 Code Call ERC-2014-STG
 Funding Scheme ERC-STG
 Starting year 2015
 Duration (year-month-day) from 2015-11-01   to  2020-10-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    MAX-PLANCK-GESELLSCHAFT ZUR FORDERUNG DER WISSENSCHAFTEN EV DE (Munich) coordinator 1˙609˙375.00

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 Project objective

Islands have played a pivotal role in evolutionary theory since Darwin and Wallace. Due to their isolation, they represent natural laboratories, providing uncomplicated microcosms where fundamental principles of the evolutionary process can be revealed. One area where island systems can provide a crucial advance is in evolutionary genetics. Here, a primary goal is to reconstruct the mechanisms, mode and tempo of the evolutionary process by identifying specific adaptive functional variants and studying the historical dynamics of these in nature. However, even with recent advances in tools and technologies (e.g., affordable genome-wide sequencing, developments in genome manipulation), the complexity of most natural systems makes this a challenging task.

The proposed research launches a program that employs a unique set of thale cress (Arabidopsis) samples from intriguing populations at the edge of the species range (Cape Verde Islands) to comprehensively characterize the adaptive process in a tractable and ecologically relevant island system. This collection represents the first population sample from this region, where a single individual was collected 30 years ago and has long been an enigma due to its remarkable phenotypic and genetic divergence. We will combine field monitoring, population genetic analyses, trait mapping, powerful new genome editing technology (CRISPR), and spatially explicit modeling to reconstruct the history of the adaptive process in exceptional detail. Moreover, synthesizing our results in the context of biological networks will provide the opportunity to decipher how epistasis and pleiotropy impacted adaptive trajectories. By applying the wealth of tools available in Arabidopsis thaliana to this intriguing natural population, we will uncover general principles of adaptation and produce a roadmap and toolkit for future research in diverse systems to predict outcomes of environmental fluctuations and longer-term changes.

 Publications

year authors and title journal last update
List of publications.
2017 Andrea Fulgione, Maarten Koornneef, Fabrice Roux, Joachim Hermisson, Angela M Hancock
Madeiran Arabidopsis thaliana Reveals Ancient Long-Range Colonization and Clarifies Demography in Eurasia
published pages: 564-574, ISSN: 0737-4038, DOI: 10.1093/molbev/msx300
Molecular Biology and Evolution 35/3 2019-05-29
2018 Andrea Fulgione, Angela M. Hancock
Archaic lineages broaden our view on the history of Arabidopsis thaliana
published pages: 1194-1198, ISSN: 0028-646X, DOI: 10.1111/nph.15244
New Phytologist 219/4 2019-05-29
2017 Arun Durvasula, Andrea Fulgione, Rafal M. Gutaker, Selen Irez Alacakaptan, Pádraic J. Flood, Célia Neto, Takashi Tsuchimatsu, Hernán A. Burbano, F. Xavier Picó, Carlos Alonso-Blanco, Angela M. Hancock
African genomes illuminate the early history and transition to selfing in Arabidopsis thaliana
published pages: 5213-5218, ISSN: 0027-8424, DOI: 10.1073/pnas.1616736114
Proceedings of the National Academy of Sciences 114/20 2019-05-28

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