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TETCOLON SIGNED

Dissecting the role of the epigenetic regulator TET2 in colorectal cancer

Total Cost €

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EC-Contrib. €

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Partnership

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 TETCOLON project word cloud

Explore the words cloud of the TETCOLON project. It provides you a very rough idea of what is the project "TETCOLON" about.

translational    hydroxymethylcytosine    methylcytosine    5hmc    dna    methylome    revealed    epithelial    oxidized    culture    ten    carcinogenesis    vulnerabilities    methylated    genes    tet    supporting    mrna    deficiency    suggests    transcriptome    disciplinary    cutting    5mc    rna    perturbed    causal    bioinformatics    epigenetic    instability    knockdown    tissue    defects    virtually    dioxygenases    protein    contain    5mcs    therapies    event    epigenetics    bystander    mouse    innovative    clinico    biology    reprogramming    therapeutic    pathological    predictive    preliminary    link    genetic    3d    combining    accumulation    translocation    correlations    methylation    epigenome    stability    genomic    epigenomic    load    mechanism    cancer    elucidate    oxidize    biomarker    contributes    ultimately    tumor    eleven    probe    clear    expression    pathogenesis    cell    demethylation    human    tet2    active    mediated    predicts    patterns    indicates    crcs    levels    oncogenic    deficient    induces    cells    suppression    colorectal    epi    basic    molecular    aberrantly    driver    colonic    tet1    crc    helping    edge    techniques    mutational    family    seq    normal    survival    significance   

Project "TETCOLON" data sheet

The following table provides information about the project.

Coordinator
UNIVERSITA DEGLI STUDI DI PAVIA 

Organization address
address: STRADA NUOVA 65
city: PAVIA
postcode: 27100
website: www.unipv.it

contact info
title: n.a.
name: n.a.
surname: n.a.
function: n.a.
email: n.a.
telephone: n.a.
fax: n.a.

 Coordinator Country Italy [IT]
 Total cost 183˙473 €
 EC max contribution 183˙473 € (100%)
 Programme 1. H2020-EU.1.3.2. (Nurturing excellence by means of cross-border and cross-sector mobility)
 Code Call H2020-MSCA-IF-2019
 Funding Scheme MSCA-IF-EF-RI
 Starting year 2020
 Duration (year-month-day) from 2020-09-01   to  2022-08-31

 Partnership

Take a look of project's partnership.

# participants  country  role  EC contrib. [€] 
1    UNIVERSITA DEGLI STUDI DI PAVIA IT (PAVIA) coordinator 183˙473.00

Map

 Project objective

Colorectal cancer (CRC) results from the accumulation of genetic and epigenetic changes in colonic epithelial cells. Epigenome studies revealed that virtually all CRCs contain aberrantly methylated genes and perturbed methylation patterns. Ten-Eleven Translocation (TET) protein family dioxygenases oxidize 5-methylcytosine (5mC) to 5-hydroxymethylcytosine (5hmC) and further to other oxidized 5mCs, supporting active DNA demethylation and helping maintain epigenomic stability. Loss of TET1 is an oncogenic driver in some CRCs. My preliminary analysis indicates that human CRCs have low TET2 mRNA levels compared to normal colorectal tissue, and suggests that low TET2 expression predicts increased mutational load and reduced overall survival. However, whether TET2 deficiency contributes to CRC pathogenesis, or represents a bystander event, remains to be established. In this proposal, I will elucidate the role of TET2 in CRC pathogenesis by testing whether TET2 knockdown induces methylome and transcriptome reprogramming, ultimately promoting (epi)genomic instability and tumor growth. I will also investigate correlations between TET2 defects and molecular/clinico-pathological parameters, and probe TET2 expression as predictive biomarker of response to CRC therapies. With these aims, I will use a multi-disciplinary approach, combining cell biology, cancer epigenetics, bioinformatics, human and mouse studies with cutting-edge techniques such as 3D cell culture and RNA-seq. This study should establish a clear causal link between TET2 loss and CRC pathogenesis, providing new insight into the mechanism of TET2-mediated tumor suppression and leading to the development of innovative therapies that exploit vulnerabilities of TET2-deficient CRC cells. Overall, this project has both basic and translational significance, and the potential to advance our understanding of CRC carcinogenesis and therapeutic response.

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The information about "TETCOLON" are provided by the European Opendata Portal: CORDIS opendata.

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